Model info
| Transcription factor | PRDM14 | ||||||||
| Model | PRD14_HUMAN.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 14 | ||||||||
| Quality | C | ||||||||
| Consensus | dRSWTAGRGWMChd | ||||||||
| wAUC | 0.8834405186743584 | ||||||||
| Best AUC | 0.8834405186743584 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | unclassified{2.3.3.0} | ||||||||
| HGNC | 14001 | ||||||||
| EntrezGene | 63978 | ||||||||
| UniProt ID | PRD14_HUMAN | ||||||||
| UniProt AC | Q9GZV8 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 207.927 | 50.881 | 158.675 | 82.517 |
| 02 | 187.428 | 14.818 | 247.015 | 50.739 |
| 03 | 45.675 | 77.067 | 348.409 | 28.85 |
| 04 | 89.658 | 12.177 | 19.122 | 379.043 |
| 05 | 3.83 | 4.073 | 15.724 | 476.373 |
| 06 | 490.625 | 5.663 | 1.963 | 1.748 |
| 07 | 38.208 | 31.961 | 428.047 | 1.784 |
| 08 | 297.44 | 0.941 | 174.554 | 27.065 |
| 09 | 44.262 | 35.142 | 408.164 | 12.431 |
| 10 | 304.526 | 67.389 | 17.588 | 110.497 |
| 11 | 103.203 | 364.41 | 23.479 | 8.908 |
| 12 | 7.657 | 395.779 | 71.446 | 25.118 |
| 13 | 70.73 | 184.644 | 24.984 | 219.642 |
| 14 | 198.47 | 80.167 | 128.903 | 92.459 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.504 | -0.881 | 0.236 | -0.409 |
| 02 | 0.401 | -2.045 | 0.675 | -0.884 |
| 03 | -0.986 | -0.476 | 1.017 | -1.426 |
| 04 | -0.327 | -2.221 | -1.812 | 1.101 |
| 05 | -3.157 | -3.113 | -1.991 | 1.329 |
| 06 | 1.358 | -2.864 | -3.583 | -3.646 |
| 07 | -1.158 | -1.329 | 1.222 | -3.635 |
| 08 | 0.86 | -3.927 | 0.33 | -1.487 |
| 09 | -1.016 | -1.238 | 1.175 | -2.203 |
| 10 | 0.883 | -0.607 | -1.889 | -0.122 |
| 11 | -0.189 | 1.062 | -1.62 | -2.493 |
| 12 | -2.62 | 1.144 | -0.55 | -1.557 |
| 13 | -0.56 | 0.386 | -1.562 | 0.558 |
| 14 | 0.458 | -0.437 | 0.03 | -0.297 |