Transcription factor | PRDM14 | ||||||||
Model | PRD14_HUMAN.H10DI.C | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | ChIP-Seq | ||||||||
Model length | 22 | ||||||||
Quality | C | ||||||||
Consensus | nnnnndRSWTAGRGWMShnnnn | ||||||||
wAUC | 0.8941958272740941 | ||||||||
Best AUC | 0.8941958272740941 | ||||||||
Benchmark datasets | 1 | ||||||||
Aligned words | 520 | ||||||||
TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
TF subfamily | unclassified{2.3.3.0} | ||||||||
HGNC | 14001 | ||||||||
EntrezGene | 63978 | ||||||||
UniProt ID | PRD14_HUMAN | ||||||||
UniProt AC | Q9GZV8 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 29.13 | 22.25 | 57.182 | 13.494 | 40.181 | 31.672 | 3.059 | 60.786 | 33.181 | 32.662 | 61.607 | 22.91 | 24.345 | 17.062 | 33.307 | 17.171 |
02 | 33.102 | 28.394 | 49.751 | 15.591 | 39.152 | 33.134 | 5.099 | 26.26 | 45.863 | 27.808 | 65.653 | 15.83 | 23.472 | 40.196 | 32.94 | 17.753 |
03 | 57.161 | 20.347 | 46.507 | 17.575 | 34.954 | 38.261 | 9.467 | 46.851 | 36.833 | 33.145 | 61.723 | 21.742 | 15.082 | 16.911 | 22.454 | 20.988 |
04 | 45.325 | 12.458 | 60.864 | 25.383 | 36.613 | 32.324 | 5.383 | 34.343 | 34.082 | 20.549 | 71.394 | 14.128 | 33.463 | 16.582 | 34.538 | 22.573 |
05 | 67.81 | 8.818 | 53.766 | 19.088 | 30.745 | 22.212 | 5.354 | 23.602 | 81.868 | 18.436 | 56.833 | 15.041 | 36.674 | 5.23 | 39.042 | 15.48 |
06 | 76.202 | 6.118 | 117.615 | 17.161 | 28.389 | 1.147 | 16.588 | 8.573 | 58.478 | 6.843 | 78.252 | 11.422 | 20.197 | 1.136 | 43.69 | 8.189 |
07 | 12.586 | 20.523 | 140.815 | 9.342 | 3.514 | 6.495 | 4.098 | 1.136 | 27.606 | 34.547 | 185.556 | 8.436 | 2.705 | 2.833 | 34.837 | 4.97 |
08 | 17.633 | 0.914 | 0.82 | 27.044 | 5.899 | 1.032 | 0.0 | 57.467 | 83.308 | 9.994 | 16.896 | 255.109 | 1.773 | 0.0 | 0.0 | 22.111 |
09 | 3.717 | 1.054 | 10.637 | 93.205 | 0.0 | 2.277 | 0.0 | 9.663 | 0.0 | 0.0 | 2.089 | 15.627 | 0.918 | 1.919 | 2.809 | 356.086 |
10 | 3.717 | 0.0 | 0.918 | 0.0 | 5.25 | 0.0 | 0.0 | 0.0 | 12.145 | 1.143 | 2.247 | 0.0 | 467.34 | 4.259 | 1.235 | 1.748 |
11 | 32.359 | 29.125 | 426.017 | 0.949 | 1.939 | 0.0 | 3.463 | 0.0 | 0.0 | 1.198 | 3.202 | 0.0 | 0.0 | 0.0 | 1.748 | 0.0 |
12 | 21.395 | 0.0 | 9.172 | 3.731 | 29.421 | 0.0 | 0.0 | 0.902 | 252.422 | 3.541 | 158.092 | 20.374 | 0.949 | 0.0 | 0.0 | 0.0 |
13 | 18.564 | 9.684 | 260.933 | 15.006 | 1.649 | 0.941 | 0.0 | 0.951 | 26.149 | 19.846 | 119.304 | 1.965 | 0.841 | 0.0 | 22.469 | 1.698 |
14 | 24.081 | 4.499 | 2.892 | 15.731 | 2.64 | 1.81 | 0.0 | 26.021 | 268.337 | 71.872 | 13.835 | 48.661 | 12.97 | 2.767 | 0.0 | 3.884 |
15 | 27.144 | 249.67 | 22.445 | 8.768 | 25.27 | 44.174 | 0.904 | 10.601 | 2.912 | 11.813 | 0.975 | 1.028 | 36.592 | 57.705 | 0.0 | 0.0 |
16 | 0.0 | 52.29 | 35.092 | 4.535 | 8.692 | 310.496 | 19.792 | 24.381 | 0.912 | 10.452 | 12.96 | 0.0 | 0.0 | 5.417 | 10.785 | 4.194 |
17 | 0.835 | 2.08 | 5.851 | 0.838 | 46.642 | 146.995 | 5.353 | 179.665 | 7.289 | 35.13 | 19.822 | 16.389 | 10.747 | 4.158 | 5.846 | 12.359 |
18 | 21.63 | 4.889 | 36.847 | 2.147 | 88.348 | 22.036 | 19.052 | 58.928 | 8.932 | 5.148 | 17.764 | 5.028 | 71.137 | 48.99 | 45.789 | 43.336 |
19 | 31.598 | 68.754 | 64.516 | 25.179 | 22.75 | 27.905 | 13.872 | 16.535 | 19.615 | 33.861 | 49.632 | 16.344 | 16.092 | 33.247 | 39.028 | 21.072 |
20 | 14.966 | 22.351 | 42.311 | 10.426 | 58.099 | 62.674 | 11.532 | 31.463 | 41.923 | 32.059 | 69.995 | 23.07 | 8.607 | 25.743 | 29.475 | 15.305 |
21 | 25.652 | 17.74 | 56.508 | 23.695 | 24.951 | 45.701 | 2.732 | 69.444 | 35.564 | 41.436 | 42.914 | 33.399 | 11.572 | 21.751 | 24.028 | 22.913 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | -0.069 | -0.335 | 0.599 | -0.824 | 0.249 | 0.013 | -2.217 | 0.659 | 0.059 | 0.044 | 0.673 | -0.306 | -0.246 | -0.595 | 0.063 | -0.589 |
02 | 0.057 | -0.095 | 0.46 | -0.683 | 0.223 | 0.058 | -1.752 | -0.172 | 0.38 | -0.115 | 0.736 | -0.668 | -0.282 | 0.249 | 0.052 | -0.556 |
03 | 0.598 | -0.423 | 0.394 | -0.566 | 0.111 | 0.2 | -1.166 | 0.401 | 0.163 | 0.058 | 0.675 | -0.357 | -0.715 | -0.604 | -0.326 | -0.392 |
04 | 0.368 | -0.901 | 0.661 | -0.205 | 0.157 | 0.033 | -1.701 | 0.093 | 0.086 | -0.413 | 0.819 | -0.779 | 0.068 | -0.623 | 0.099 | -0.321 |
05 | 0.768 | -1.234 | 0.537 | -0.485 | -0.016 | -0.336 | -1.706 | -0.277 | 0.955 | -0.519 | 0.593 | -0.718 | 0.158 | -1.728 | 0.22 | -0.69 |
06 | 0.884 | -1.582 | 1.316 | -0.589 | -0.095 | -3.026 | -0.623 | -1.261 | 0.621 | -1.476 | 0.911 | -0.985 | -0.43 | -3.033 | 0.332 | -1.305 |
07 | -0.891 | -0.414 | 1.496 | -1.179 | -2.093 | -1.525 | -1.953 | -3.033 | -0.122 | 0.099 | 1.771 | -1.277 | -2.325 | -2.285 | 0.107 | -1.776 |
08 | -0.563 | -3.19 | -3.265 | -0.143 | -1.616 | -3.104 | -4.4 | 0.604 | 0.973 | -1.114 | -0.605 | 2.089 | -2.684 | -4.4 | -4.4 | -0.341 |
09 | -2.042 | -3.088 | -1.054 | 1.085 | -4.4 | -2.474 | -4.4 | -1.147 | -4.4 | -4.4 | -2.547 | -0.681 | -3.187 | -2.618 | -2.292 | 2.422 |
10 | -2.042 | -4.4 | -3.187 | -4.4 | -1.725 | -4.4 | -4.4 | -4.4 | -0.926 | -3.028 | -2.485 | -4.4 | 2.694 | -1.918 | -2.97 | -2.695 |
11 | 0.034 | -0.07 | 2.601 | -3.164 | -2.61 | -4.4 | -2.106 | -4.4 | -4.4 | -2.993 | -2.176 | -4.4 | -4.4 | -4.4 | -2.695 | -4.4 |
12 | -0.373 | -4.4 | -1.197 | -2.039 | -0.06 | -4.4 | -4.4 | -3.199 | 2.078 | -2.086 | 1.611 | -0.421 | -3.164 | -4.4 | -4.4 | -4.4 |
13 | -0.512 | -1.145 | 2.111 | -0.72 | -2.743 | -3.17 | -4.4 | -3.162 | -0.176 | -0.447 | 1.331 | -2.599 | -3.248 | -4.4 | -0.325 | -2.719 |
14 | -0.257 | -1.868 | -2.266 | -0.674 | -2.346 | -2.667 | -4.4 | -0.181 | 2.139 | 0.826 | -0.8 | 0.438 | -0.862 | -2.305 | -4.4 | -2.002 |
15 | -0.139 | 2.067 | -0.326 | -1.24 | -0.21 | 0.343 | -3.198 | -1.057 | -2.26 | -0.953 | -3.145 | -3.107 | 0.156 | 0.608 | -4.4 | -4.4 |
16 | -4.4 | 0.51 | 0.115 | -1.86 | -1.248 | 2.285 | -0.45 | -0.245 | -3.192 | -1.071 | -0.863 | -4.4 | -4.4 | -1.696 | -1.041 | -1.932 |
17 | -3.253 | -2.551 | -1.624 | -3.25 | 0.396 | 1.539 | -1.707 | 1.739 | -1.416 | 0.116 | -0.448 | -0.634 | -1.044 | -1.94 | -1.624 | -0.909 |
18 | -0.362 | -1.791 | 0.163 | -2.524 | 1.031 | -0.344 | -0.487 | 0.629 | -1.222 | -1.743 | -0.556 | -1.765 | 0.816 | 0.445 | 0.378 | 0.324 |
19 | 0.011 | 0.782 | 0.719 | -0.213 | -0.313 | -0.112 | -0.797 | -0.626 | -0.458 | 0.079 | 0.458 | -0.637 | -0.652 | 0.061 | 0.22 | -0.388 |
20 | -0.723 | -0.33 | 0.3 | -1.073 | 0.614 | 0.69 | -0.976 | 0.007 | 0.291 | 0.025 | 0.8 | -0.299 | -1.258 | -0.191 | -0.058 | -0.701 |
21 | -0.195 | -0.557 | 0.587 | -0.273 | -0.222 | 0.376 | -2.316 | 0.792 | 0.128 | 0.279 | 0.314 | 0.066 | -0.973 | -0.357 | -0.259 | -0.306 |