Model info
| Transcription factor | PPARA | ||||||||
| Model | PPARA_HUMAN.H10MO.S | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 7 | ||||||||
| Quality | S | ||||||||
| Consensus | dAGGTCA | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 119 | ||||||||
| TF family | Thyroid hormone receptor-related factors (NR1){2.1.2} | ||||||||
| TF subfamily | PPAR (NR1C){2.1.2.5} | ||||||||
| HGNC | 9232 | ||||||||
| EntrezGene | 5465 | ||||||||
| UniProt ID | PPARA_HUMAN | ||||||||
| UniProt AC | Q07869 | ||||||||
| Comment | Secondary motif. | ||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 55.36 | 10.96 | 30.518 | 17.142 |
| 02 | 91.499 | 1.012 | 20.458 | 1.012 |
| 03 | 0.0 | 0.0 | 113.98 | 0.0 |
| 04 | 0.0 | 1.686 | 104.875 | 7.419 |
| 05 | 2.923 | 3.709 | 3.822 | 103.526 |
| 06 | 1.124 | 111.844 | 0.0 | 1.012 |
| 07 | 100.07 | 0.253 | 6.548 | 7.11 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.645 | -0.894 | 0.066 | -0.482 |
| 02 | 1.139 | -2.604 | -0.316 | -2.604 |
| 03 | -3.222 | -3.222 | 1.356 | -3.222 |
| 04 | -3.222 | -2.336 | 1.274 | -1.238 |
| 05 | -1.978 | -1.803 | -1.78 | 1.261 |
| 06 | -2.554 | 1.337 | -3.222 | -2.604 |
| 07 | 1.227 | -3.028 | -1.345 | -1.275 |