Model info
| Transcription factor | Pou5f1 | ||||||||
| Model | PO5F1_MOUSE.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 16 | ||||||||
| Quality | A | ||||||||
| Consensus | bYWTTSWhATGYARAW | ||||||||
| wAUC | 0.8948666484183225 | ||||||||
| Best AUC | 0.966759112085938 | ||||||||
| Benchmark datasets | 6 | ||||||||
| Aligned words | 1396 | ||||||||
| TF family | POU domain factors{3.1.10} | ||||||||
| TF subfamily | POU5 (Oct-3/4-like factors){3.1.10.5} | ||||||||
| MGI | 101893 | ||||||||
| EntrezGene | 18999 | ||||||||
| UniProt ID | PO5F1_MOUSE | ||||||||
| UniProt AC | P20263 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 173.12 | 608.576 | 196.963 | 341.798 |
| 02 | 124.848 | 759.693 | 78.579 | 357.336 |
| 03 | 547.539 | 79.032 | 42.587 | 651.297 |
| 04 | 7.93 | 87.351 | 39.176 | 1185.999 |
| 05 | 46.417 | 36.29 | 108.754 | 1128.995 |
| 06 | 167.164 | 292.331 | 773.055 | 87.905 |
| 07 | 387.031 | 64.941 | 66.211 | 802.273 |
| 08 | 282.442 | 325.228 | 143.326 | 569.46 |
| 09 | 1165.393 | 21.376 | 16.549 | 117.137 |
| 10 | 34.485 | 3.448 | 7.585 | 1274.938 |
| 11 | 6.896 | 42.55 | 1189.852 | 81.158 |
| 12 | 9.826 | 1011.578 | 102.443 | 196.609 |
| 13 | 1046.898 | 11.722 | 22.066 | 239.77 |
| 14 | 841.528 | 78.552 | 273.068 | 127.308 |
| 15 | 1096.052 | 84.728 | 83.923 | 55.753 |
| 16 | 180.995 | 124.398 | 153.561 | 861.502 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.641 | 0.609 | -0.513 | 0.035 |
| 02 | -0.963 | 0.83 | -1.418 | 0.079 |
| 03 | 0.504 | -1.413 | -2.012 | 0.677 |
| 04 | -3.53 | -1.315 | -2.092 | 1.275 |
| 05 | -1.929 | -2.165 | -1.099 | 1.226 |
| 06 | -0.675 | -0.121 | 0.848 | -1.308 |
| 07 | 0.158 | -1.604 | -1.585 | 0.885 |
| 08 | -0.155 | -0.015 | -0.827 | 0.543 |
| 09 | 1.257 | -2.662 | -2.895 | -1.026 |
| 10 | -2.214 | -4.148 | -3.566 | 1.347 |
| 11 | -3.642 | -2.013 | 1.278 | -1.387 |
| 12 | -3.352 | 1.116 | -1.158 | -0.515 |
| 13 | 1.15 | -3.201 | -2.633 | -0.318 |
| 14 | 0.932 | -1.418 | -0.189 | -0.944 |
| 15 | 1.196 | -1.344 | -1.354 | -1.752 |
| 16 | -0.597 | -0.967 | -0.759 | 0.956 |