Model info
| Transcription factor | POU5F1 | ||||||||
| Model | PO5F1_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 16 | ||||||||
| Quality | A | ||||||||
| Consensus | bYWTTvWhATGCAdWh | ||||||||
| wAUC | 0.9087748134662249 | ||||||||
| Best AUC | 0.9343883370219492 | ||||||||
| Benchmark datasets | 4 | ||||||||
| Aligned words | 503 | ||||||||
| TF family | POU domain factors{3.1.10} | ||||||||
| TF subfamily | POU5 (Oct-3/4-like factors){3.1.10.5} | ||||||||
| HGNC | 9221 | ||||||||
| EntrezGene | 5460 | ||||||||
| UniProt ID | PO5F1_HUMAN | ||||||||
| UniProt AC | Q01860 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 58.486 | 233.034 | 101.01 | 107.47 |
| 02 | 32.382 | 278.803 | 21.963 | 166.852 |
| 03 | 234.89 | 26.434 | 10.471 | 228.205 |
| 04 | 8.019 | 24.22 | 3.017 | 464.743 |
| 05 | 53.522 | 1.778 | 44.779 | 399.921 |
| 06 | 54.296 | 167.519 | 241.992 | 36.193 |
| 07 | 209.681 | 3.977 | 12.418 | 273.924 |
| 08 | 81.337 | 113.459 | 51.192 | 254.012 |
| 09 | 465.023 | 2.812 | 9.852 | 22.312 |
| 10 | 7.632 | 1.818 | 9.754 | 480.796 |
| 11 | 7.011 | 0.851 | 458.59 | 33.548 |
| 12 | 0.98 | 390.212 | 33.793 | 75.015 |
| 13 | 393.987 | 4.943 | 29.05 | 72.021 |
| 14 | 255.298 | 69.489 | 89.382 | 85.831 |
| 15 | 379.37 | 23.002 | 44.746 | 52.881 |
| 16 | 75.858 | 73.527 | 54.937 | 295.678 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.746 | 0.617 | -0.21 | -0.149 |
| 02 | -1.316 | 0.795 | -1.683 | 0.286 |
| 03 | 0.625 | -1.509 | -2.354 | 0.596 |
| 04 | -2.582 | -1.591 | -3.321 | 1.304 |
| 05 | -0.832 | -3.637 | -1.005 | 1.154 |
| 06 | -0.818 | 0.29 | 0.655 | -1.21 |
| 07 | 0.512 | -3.13 | -2.204 | 0.778 |
| 08 | -0.423 | -0.096 | -0.875 | 0.703 |
| 09 | 1.305 | -3.367 | -2.407 | -1.668 |
| 10 | -2.623 | -3.625 | -2.415 | 1.338 |
| 11 | -2.693 | -3.963 | 1.291 | -1.282 |
| 12 | -3.911 | 1.13 | -1.275 | -0.502 |
| 13 | 1.14 | -2.969 | -1.42 | -0.542 |
| 14 | 0.708 | -0.577 | -0.331 | -0.37 |
| 15 | 1.102 | -1.64 | -1.006 | -0.844 |
| 16 | -0.492 | -0.522 | -0.807 | 0.854 |