Model info
| Transcription factor | POU4F3 | ||||||||
| Model | PO4F3_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 15 | ||||||||
| Quality | D | ||||||||
| Consensus | WhATTAATTATTYAh | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 6312 | ||||||||
| TF family | POU domain factors{3.1.10} | ||||||||
| TF subfamily | POU4 (Brn-3-like factors){3.1.10.4} | ||||||||
| HGNC | 9220 | ||||||||
| EntrezGene | 5459 | ||||||||
| UniProt ID | PO4F3_HUMAN | ||||||||
| UniProt AC | Q15319 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 844.25 | 658.25 | 798.25 | 4010.25 |
| 02 | 1440.75 | 3583.75 | 502.75 | 783.75 |
| 03 | 6000.25 | 89.25 | 97.25 | 124.25 |
| 04 | 13.0 | 9.0 | 7.0 | 6282.0 |
| 05 | 540.5 | 314.5 | 149.5 | 5306.5 |
| 06 | 6007.5 | 11.5 | 11.5 | 280.5 |
| 07 | 6089.0 | 31.0 | 26.0 | 165.0 |
| 08 | 433.0 | 22.0 | 28.0 | 5828.0 |
| 09 | 1320.0 | 18.0 | 2.0 | 4971.0 |
| 10 | 6245.0 | 2.0 | 5.0 | 59.0 |
| 11 | 31.0 | 6.0 | 2.0 | 6272.0 |
| 12 | 28.5 | 19.5 | 2116.5 | 4146.5 |
| 13 | 753.75 | 4531.75 | 105.75 | 919.75 |
| 14 | 5421.0 | 265.0 | 274.0 | 351.0 |
| 15 | 839.25 | 839.25 | 766.25 | 3866.25 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.624 | -0.872 | -0.68 | 0.932 |
| 02 | -0.091 | 0.82 | -1.141 | -0.698 |
| 03 | 1.335 | -2.849 | -2.766 | -2.525 |
| 04 | -4.645 | -4.95 | -5.147 | 1.381 |
| 05 | -1.069 | -1.607 | -2.343 | 1.212 |
| 06 | 1.336 | -4.749 | -4.749 | -1.721 |
| 07 | 1.349 | -3.863 | -4.026 | -2.246 |
| 08 | -1.289 | -4.179 | -3.958 | 1.306 |
| 09 | -0.178 | -4.36 | -5.933 | 1.147 |
| 10 | 1.375 | -5.933 | -5.393 | -3.251 |
| 11 | -3.863 | -5.263 | -5.933 | 1.379 |
| 12 | -3.941 | -4.288 | 0.293 | 0.965 |
| 13 | -0.737 | 1.054 | -2.684 | -0.539 |
| 14 | 1.233 | -1.777 | -1.744 | -1.498 |
| 15 | -0.63 | -0.63 | -0.721 | 0.895 |