Model info
| Transcription factor | POU4F2 | ||||||||
| Model | PO4F2_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 13 | ||||||||
| Quality | D | ||||||||
| Consensus | YvTTAATGAKhnn | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 31 | ||||||||
| TF family | POU domain factors{3.1.10} | ||||||||
| TF subfamily | POU4 (Brn-3-like factors){3.1.10.4} | ||||||||
| HGNC | 9219 | ||||||||
| EntrezGene | 5458 | ||||||||
| UniProt ID | PO4F2_HUMAN | ||||||||
| UniProt AC | Q12837 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.297 | 8.421 | 0.766 | 15.736 |
| 02 | 13.992 | 3.828 | 6.124 | 3.275 |
| 03 | 0.0 | 5.359 | 0.0 | 21.861 |
| 04 | 0.0 | 0.0 | 0.0 | 27.219 |
| 05 | 27.219 | 0.0 | 0.0 | 0.0 |
| 06 | 27.219 | 0.0 | 0.0 | 0.0 |
| 07 | 0.0 | 0.0 | 0.0 | 27.219 |
| 08 | 0.0 | 0.0 | 20.117 | 7.103 |
| 09 | 23.179 | 0.0 | 2.51 | 1.531 |
| 10 | 0.0 | 2.892 | 18.373 | 5.954 |
| 11 | 3.275 | 12.248 | 1.531 | 10.165 |
| 12 | 4.041 | 4.593 | 4.041 | 14.545 |
| 13 | 2.297 | 2.297 | 11.483 | 11.143 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.894 | 0.192 | -1.568 | 0.775 |
| 02 | 0.664 | -0.495 | -0.093 | -0.621 |
| 03 | -2.223 | -0.21 | -2.223 | 1.09 |
| 04 | -2.223 | -2.223 | -2.223 | 1.302 |
| 05 | 1.302 | -2.223 | -2.223 | -2.223 |
| 06 | 1.302 | -2.223 | -2.223 | -2.223 |
| 07 | -2.223 | -2.223 | -2.223 | 1.302 |
| 08 | -2.223 | -2.223 | 1.01 | 0.038 |
| 09 | 1.146 | -2.223 | -0.828 | -1.175 |
| 10 | -2.223 | -0.719 | 0.923 | -0.118 |
| 11 | -0.621 | 0.538 | -1.175 | 0.365 |
| 12 | -0.45 | -0.342 | -0.45 | 0.7 |
| 13 | -0.894 | -0.894 | 0.478 | 0.45 |