Model info
| Transcription factor | POU4F1 | ||||||||
| Model | PO4F1_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 14 | ||||||||
| Quality | D | ||||||||
| Consensus | hATWAATTATTYAd | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 7624 | ||||||||
| TF family | POU domain factors{3.1.10} | ||||||||
| TF subfamily | POU4 (Brn-3-like factors){3.1.10.4} | ||||||||
| HGNC | 9218 | ||||||||
| EntrezGene | 5457 | ||||||||
| UniProt ID | PO4F1_HUMAN | ||||||||
| UniProt AC | Q01851 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1830.5 | 3988.5 | 683.5 | 1121.5 |
| 02 | 6475.75 | 365.75 | 389.75 | 392.75 |
| 03 | 159.75 | 151.75 | 147.75 | 7164.75 |
| 04 | 1698.75 | 536.75 | 436.75 | 4951.75 |
| 05 | 7235.0 | 15.0 | 43.0 | 331.0 |
| 06 | 7221.0 | 53.0 | 30.0 | 320.0 |
| 07 | 717.0 | 36.0 | 41.0 | 6830.0 |
| 08 | 2417.0 | 33.0 | 12.0 | 5162.0 |
| 09 | 7591.0 | 3.0 | 0.0 | 30.0 |
| 10 | 81.0 | 3.0 | 10.0 | 7530.0 |
| 11 | 19.75 | 5.75 | 2173.75 | 5424.75 |
| 12 | 969.5 | 4983.5 | 218.5 | 1452.5 |
| 13 | 6700.75 | 270.75 | 307.75 | 344.75 |
| 14 | 1047.75 | 980.75 | 992.75 | 4602.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.04 | 0.738 | -1.023 | -0.53 |
| 02 | 1.222 | -1.646 | -1.583 | -1.575 |
| 03 | -2.466 | -2.517 | -2.543 | 1.323 |
| 04 | -0.115 | -1.264 | -1.469 | 0.954 |
| 05 | 1.333 | -4.707 | -3.742 | -1.745 |
| 06 | 1.331 | -3.542 | -4.081 | -1.779 |
| 07 | -0.976 | -3.91 | -3.787 | 1.275 |
| 08 | 0.237 | -3.992 | -4.898 | 0.996 |
| 09 | 1.381 | -5.899 | -6.75 | -4.081 |
| 10 | -3.132 | -5.899 | -5.05 | 1.373 |
| 11 | -4.464 | -5.476 | 0.131 | 1.045 |
| 12 | -0.675 | 0.96 | -2.157 | -0.271 |
| 13 | 1.256 | -1.945 | -1.817 | -1.705 |
| 14 | -0.597 | -0.663 | -0.651 | 0.881 |