Model info
| Transcription factor | POU3F4 | ||||||||
| Model | PO3F4_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 17 | ||||||||
| Quality | D | ||||||||
| Consensus | dhWTWWGCATAAWYhdd | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 5283 | ||||||||
| TF family | POU domain factors{3.1.10} | ||||||||
| TF subfamily | POU3 (Oct-6-like factors){3.1.10.3} | ||||||||
| HGNC | 9217 | ||||||||
| EntrezGene | 5456 | ||||||||
| UniProt ID | PO3F4_HUMAN | ||||||||
| UniProt AC | P49335 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1285.5 | 522.5 | 610.5 | 2864.5 |
| 02 | 2503.75 | 1298.75 | 500.75 | 979.75 |
| 03 | 3794.5 | 291.5 | 427.5 | 769.5 |
| 04 | 261.5 | 521.5 | 203.5 | 4296.5 |
| 05 | 1557.75 | 109.75 | 223.75 | 3391.75 |
| 06 | 1353.5 | 188.5 | 11.5 | 3729.5 |
| 07 | 360.5 | 51.5 | 4846.5 | 24.5 |
| 08 | 290.0 | 4980.0 | 0.0 | 13.0 |
| 09 | 5248.0 | 16.0 | 7.0 | 12.0 |
| 10 | 13.0 | 5.0 | 1.0 | 5264.0 |
| 11 | 5034.0 | 12.0 | 58.0 | 179.0 |
| 12 | 3893.0 | 124.0 | 19.0 | 1247.0 |
| 13 | 1449.0 | 215.0 | 184.0 | 3435.0 |
| 14 | 708.75 | 753.75 | 602.75 | 3217.75 |
| 15 | 2056.75 | 649.75 | 517.75 | 2058.75 |
| 16 | 2608.5 | 604.5 | 797.5 | 1272.5 |
| 17 | 1324.75 | 892.75 | 971.75 | 2093.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.027 | -0.925 | -0.77 | 0.773 |
| 02 | 0.639 | -0.017 | -0.967 | -0.298 |
| 03 | 1.054 | -1.505 | -1.125 | -0.539 |
| 04 | -1.613 | -0.927 | -1.861 | 1.178 |
| 05 | 0.165 | -2.47 | -1.768 | 0.942 |
| 06 | 0.024 | -1.937 | -4.574 | 1.037 |
| 07 | -1.294 | -3.205 | 1.299 | -3.905 |
| 08 | -1.51 | 1.326 | -6.425 | -4.47 |
| 09 | 1.378 | -4.289 | -4.975 | -4.538 |
| 10 | -4.47 | -5.221 | -6.042 | 1.381 |
| 11 | 1.337 | -4.538 | -3.091 | -1.988 |
| 12 | 1.08 | -2.35 | -4.136 | -0.057 |
| 13 | 0.093 | -1.807 | -1.961 | 0.955 |
| 14 | -0.621 | -0.56 | -0.783 | 0.89 |
| 15 | 0.442 | -0.708 | -0.934 | 0.443 |
| 16 | 0.68 | -0.78 | -0.503 | -0.037 |
| 17 | 0.003 | -0.391 | -0.306 | 0.46 |