Model info
| Transcription factor | Pou2f2 | ||||||||
| Model | PO2F2_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 9 | ||||||||
| Quality | B | ||||||||
| Consensus | YATGCAAAT | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 1296 | ||||||||
| TF family | POU domain factors{3.1.10} | ||||||||
| TF subfamily | POU2 (Oct-1/2-like factors){3.1.10.2} | ||||||||
| MGI | 101897 | ||||||||
| EntrezGene | 18987 | ||||||||
| UniProt ID | PO2F2_MOUSE | ||||||||
| UniProt AC | Q00196 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 177.347 | 196.147 | 34.699 | 792.817 |
| 02 | 1201.01 | 0.0 | 0.0 | 0.0 |
| 03 | 0.0 | 0.0 | 0.0 | 1201.01 |
| 04 | 0.0 | 0.0 | 1045.698 | 155.312 |
| 05 | 0.0 | 1161.309 | 0.0 | 39.701 |
| 06 | 1201.01 | 0.0 | 0.0 | 0.0 |
| 07 | 1036.318 | 0.0 | 0.0 | 164.692 |
| 08 | 1201.01 | 0.0 | 0.0 | 0.0 |
| 09 | 91.203 | 56.632 | 4.191 | 1048.984 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.522 | -0.423 | -2.114 | 0.967 |
| 02 | 1.382 | -5.138 | -5.138 | -5.138 |
| 03 | -5.138 | -5.138 | -5.138 | 1.382 |
| 04 | -5.138 | -5.138 | 1.244 | -0.654 |
| 05 | -5.138 | 1.348 | -5.138 | -1.985 |
| 06 | 1.382 | -5.138 | -5.138 | -5.138 |
| 07 | 1.235 | -5.138 | -5.138 | -0.596 |
| 08 | 1.382 | -5.138 | -5.138 | -5.138 |
| 09 | -1.178 | -1.643 | -3.925 | 1.247 |