Model info
| Transcription factor | POU2F2 | ||||||||
| Model | PO2F2_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 16 | ||||||||
| Quality | D | ||||||||
| Consensus | hvATTTGCATAWdhWd | ||||||||
| wAUC | 0.793954631423199 | ||||||||
| Best AUC | 0.793954631423199 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 8293 | ||||||||
| TF family | POU domain factors{3.1.10} | ||||||||
| TF subfamily | POU2 (Oct-1/2-like factors){3.1.10.2} | ||||||||
| HGNC | 9213 | ||||||||
| EntrezGene | 5452 | ||||||||
| UniProt ID | PO2F2_HUMAN | ||||||||
| UniProt AC | P09086 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1874.75 | 1457.75 | 1423.75 | 3536.75 |
| 02 | 3868.75 | 2009.75 | 1246.75 | 1167.75 |
| 03 | 7556.5 | 191.5 | 128.5 | 416.5 |
| 04 | 81.25 | 87.25 | 43.25 | 8081.25 |
| 05 | 523.25 | 132.25 | 13.25 | 7624.25 |
| 06 | 1590.25 | 8.25 | 2.25 | 6692.25 |
| 07 | 549.0 | 117.0 | 7622.0 | 5.0 |
| 08 | 484.0 | 7809.0 | 0.0 | 0.0 |
| 09 | 8267.0 | 3.0 | 19.0 | 4.0 |
| 10 | 2.25 | 0.25 | 0.25 | 8290.25 |
| 11 | 7988.25 | 47.25 | 221.25 | 36.25 |
| 12 | 2505.75 | 688.75 | 144.75 | 4953.75 |
| 13 | 1306.0 | 614.0 | 1628.0 | 4745.0 |
| 14 | 1207.75 | 3392.75 | 576.75 | 3115.75 |
| 15 | 4988.75 | 554.75 | 647.75 | 2101.75 |
| 16 | 2923.75 | 911.75 | 1082.75 | 3374.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.101 | -0.352 | -0.375 | 0.534 |
| 02 | 0.623 | -0.031 | -0.508 | -0.573 |
| 03 | 1.293 | -2.371 | -2.765 | -1.601 |
| 04 | -3.213 | -3.144 | -3.82 | 1.36 |
| 05 | -1.374 | -2.736 | -4.897 | 1.301 |
| 06 | -0.265 | -5.286 | -6.133 | 1.171 |
| 07 | -1.326 | -2.857 | 1.301 | -5.656 |
| 08 | -1.451 | 1.325 | -6.824 | -6.824 |
| 09 | 1.382 | -5.979 | -4.581 | -5.804 |
| 10 | -6.133 | -6.719 | -6.719 | 1.385 |
| 11 | 1.348 | -3.736 | -2.229 | -3.987 |
| 12 | 0.189 | -1.1 | -2.647 | 0.87 |
| 13 | -0.462 | -1.214 | -0.241 | 0.827 |
| 14 | -0.54 | 0.492 | -1.277 | 0.407 |
| 15 | 0.877 | -1.315 | -1.161 | 0.014 |
| 16 | 0.343 | -0.82 | -0.649 | 0.487 |