Model info
| Transcription factor | POU2F2 | ||||||||
| Model | PO2F2_HUMAN.H10DI.C | ||||||||
| Model type | Dinucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 19 | ||||||||
| Quality | C | ||||||||
| Consensus | nbnnnbdnWTYTGCATRdn | ||||||||
| wAUC | 0.8171319929988404 | ||||||||
| Best AUC | 0.8171319929988404 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 459 | ||||||||
| TF family | POU domain factors{3.1.10} | ||||||||
| TF subfamily | POU2 (Oct-1/2-like factors){3.1.10.2} | ||||||||
| HGNC | 9213 | ||||||||
| EntrezGene | 5452 | ||||||||
| UniProt ID | PO2F2_HUMAN | ||||||||
| UniProt AC | P09086 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | 17.788 | 33.7 | 25.875 | 11.167 | 26.579 | 50.992 | 9.385 | 31.635 | 11.83 | 55.416 | 60.021 | 16.75 | 5.927 | 24.084 | 37.506 | 36.775 |
| 02 | 12.451 | 16.91 | 17.365 | 15.398 | 24.633 | 66.508 | 23.149 | 49.902 | 41.239 | 31.783 | 45.44 | 14.325 | 13.09 | 27.868 | 30.978 | 24.391 |
| 03 | 51.521 | 15.198 | 16.965 | 7.728 | 45.572 | 41.47 | 18.503 | 37.524 | 24.439 | 32.734 | 27.584 | 32.176 | 15.873 | 29.367 | 37.068 | 21.708 |
| 04 | 52.61 | 32.509 | 38.705 | 13.582 | 35.403 | 38.093 | 15.829 | 29.444 | 21.851 | 39.879 | 24.653 | 13.736 | 16.018 | 24.145 | 38.338 | 20.634 |
| 05 | 19.097 | 41.652 | 27.477 | 37.657 | 25.699 | 57.656 | 1.853 | 49.419 | 14.276 | 43.004 | 34.774 | 25.471 | 6.109 | 24.444 | 27.259 | 19.584 |
| 06 | 19.69 | 11.721 | 19.6 | 14.17 | 19.075 | 30.764 | 9.032 | 107.885 | 27.913 | 27.031 | 14.861 | 21.557 | 20.876 | 15.942 | 50.959 | 44.353 |
| 07 | 23.929 | 20.774 | 24.935 | 17.916 | 21.943 | 21.541 | 5.632 | 36.342 | 36.144 | 30.237 | 15.269 | 12.803 | 21.301 | 93.225 | 49.079 | 24.361 |
| 08 | 73.984 | 13.329 | 9.125 | 6.879 | 125.764 | 6.805 | 21.736 | 11.472 | 52.007 | 14.439 | 3.862 | 24.605 | 53.564 | 5.181 | 12.099 | 20.578 |
| 09 | 3.342 | 5.904 | 8.385 | 287.689 | 2.146 | 1.139 | 1.944 | 34.525 | 18.205 | 1.945 | 7.903 | 18.769 | 0.909 | 6.009 | 4.48 | 52.136 |
| 10 | 2.847 | 12.636 | 1.356 | 7.762 | 4.989 | 2.136 | 0.0 | 7.873 | 1.165 | 11.774 | 1.84 | 7.933 | 33.335 | 31.543 | 2.063 | 326.178 |
| 11 | 2.207 | 0.0 | 0.0 | 40.13 | 6.476 | 1.37 | 0.0 | 50.242 | 0.881 | 2.067 | 0.0 | 2.312 | 11.211 | 2.692 | 0.0 | 335.843 |
| 12 | 1.75 | 0.0 | 19.025 | 0.0 | 0.0 | 0.855 | 2.955 | 2.317 | 0.0 | 0.0 | 0.0 | 0.0 | 35.39 | 16.34 | 364.693 | 12.104 |
| 13 | 3.574 | 29.367 | 0.0 | 4.2 | 1.969 | 10.261 | 0.0 | 4.966 | 11.524 | 362.625 | 2.112 | 10.411 | 1.257 | 9.831 | 0.0 | 3.334 |
| 14 | 15.384 | 0.0 | 2.939 | 0.0 | 392.331 | 4.775 | 12.33 | 2.649 | 1.159 | 0.0 | 0.954 | 0.0 | 18.836 | 0.0 | 4.074 | 0.0 |
| 15 | 4.784 | 7.06 | 14.983 | 400.882 | 0.0 | 0.0 | 0.0 | 4.775 | 0.0 | 1.002 | 2.206 | 17.088 | 0.0 | 0.0 | 0.932 | 1.717 |
| 16 | 3.562 | 0.0 | 0.0 | 1.222 | 5.282 | 1.899 | 0.0 | 0.881 | 5.837 | 1.139 | 10.189 | 0.956 | 248.9 | 19.913 | 95.537 | 60.113 |
| 17 | 108.034 | 30.696 | 41.96 | 82.892 | 0.926 | 5.89 | 2.665 | 13.469 | 32.286 | 14.693 | 22.744 | 36.003 | 2.973 | 8.007 | 5.462 | 46.73 |
| 18 | 40.795 | 20.065 | 25.906 | 57.454 | 13.025 | 16.852 | 11.79 | 17.619 | 20.801 | 22.453 | 15.049 | 14.527 | 13.985 | 31.88 | 54.035 | 79.194 |
PWM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | -0.462 | 0.167 | -0.094 | -0.915 | -0.068 | 0.577 | -1.083 | 0.104 | -0.86 | 0.66 | 0.739 | -0.521 | -1.52 | -0.165 | 0.273 | 0.253 |
| 02 | -0.81 | -0.512 | -0.486 | -0.603 | -0.142 | 0.841 | -0.204 | 0.556 | 0.367 | 0.109 | 0.463 | -0.674 | -0.761 | -0.021 | 0.084 | -0.152 |
| 03 | 0.587 | -0.616 | -0.509 | -1.269 | 0.466 | 0.372 | -0.424 | 0.273 | -0.15 | 0.138 | -0.031 | 0.121 | -0.574 | 0.031 | 0.261 | -0.267 |
| 04 | 0.608 | 0.131 | 0.304 | -0.725 | 0.216 | 0.288 | -0.576 | 0.033 | -0.26 | 0.333 | -0.142 | -0.715 | -0.565 | -0.162 | 0.294 | -0.317 |
| 05 | -0.393 | 0.376 | -0.035 | 0.277 | -0.101 | 0.699 | -2.558 | 0.546 | -0.677 | 0.408 | 0.198 | -0.11 | -1.491 | -0.15 | -0.043 | -0.368 |
| 06 | -0.363 | -0.869 | -0.367 | -0.684 | -0.394 | 0.077 | -1.12 | 1.323 | -0.019 | -0.051 | -0.638 | -0.274 | -0.305 | -0.569 | 0.576 | 0.439 |
| 07 | -0.171 | -0.31 | -0.131 | -0.455 | -0.256 | -0.274 | -1.568 | 0.241 | 0.236 | 0.06 | -0.611 | -0.783 | -0.285 | 1.177 | 0.539 | -0.153 |
| 08 | 0.947 | -0.744 | -1.11 | -1.379 | 1.475 | -1.39 | -0.266 | -0.889 | 0.597 | -0.666 | -1.916 | -0.144 | 0.626 | -1.646 | -0.838 | -0.319 |
| 09 | -2.047 | -1.524 | -1.191 | 2.301 | -2.434 | -2.942 | -2.518 | 0.191 | -0.44 | -2.517 | -1.247 | -0.41 | -3.106 | -1.507 | -1.78 | 0.599 |
| 10 | -2.19 | -0.796 | -2.809 | -1.265 | -1.681 | -2.438 | -4.323 | -1.251 | -2.925 | -0.864 | -2.563 | -1.244 | 0.156 | 0.101 | -2.468 | 2.427 |
| 11 | -2.41 | -4.323 | -4.323 | 0.34 | -1.436 | -2.801 | -4.323 | 0.562 | -3.128 | -2.466 | -4.323 | -2.371 | -0.912 | -2.239 | -4.323 | 2.456 |
| 12 | -2.604 | -4.323 | -0.396 | -4.323 | -4.323 | -3.148 | -2.157 | -2.369 | -4.323 | -4.323 | -4.323 | -4.323 | 0.215 | -0.545 | 2.538 | -0.837 |
| 13 | -1.987 | 0.031 | -4.323 | -1.84 | -2.507 | -0.997 | -4.323 | -1.685 | -0.885 | 2.532 | -2.448 | -0.983 | -2.868 | -1.038 | -4.323 | -2.049 |
| 14 | -0.604 | -4.323 | -2.161 | -4.323 | 2.611 | -1.722 | -0.819 | -2.253 | -2.929 | -4.323 | -3.072 | -4.323 | -0.406 | -4.323 | -1.868 | -4.323 |
| 15 | -1.72 | -1.355 | -0.63 | 2.633 | -4.323 | -4.323 | -4.323 | -1.722 | -4.323 | -3.036 | -2.411 | -0.501 | -4.323 | -4.323 | -3.088 | -2.62 |
| 16 | -1.99 | -4.323 | -4.323 | -2.889 | -1.628 | -2.537 | -4.323 | -3.128 | -1.534 | -2.942 | -1.004 | -3.071 | 2.157 | -0.352 | 1.202 | 0.741 |
| 17 | 1.324 | 0.075 | 0.384 | 1.06 | -3.093 | -1.526 | -2.248 | -0.734 | 0.124 | -0.649 | -0.221 | 0.232 | -2.151 | -1.235 | -1.597 | 0.491 |
| 18 | 0.356 | -0.344 | -0.093 | 0.696 | -0.766 | -0.515 | -0.863 | -0.472 | -0.309 | -0.234 | -0.626 | -0.66 | -0.697 | 0.112 | 0.635 | 1.015 |