Model info
| Transcription factor | Pou2f1 | ||||||||
| Model | PO2F1_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 9 | ||||||||
| Quality | B | ||||||||
| Consensus | hATGYAAAW | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 214 | ||||||||
| TF family | POU domain factors{3.1.10} | ||||||||
| TF subfamily | POU2 (Oct-1/2-like factors){3.1.10.2} | ||||||||
| MGI | 101898 | ||||||||
| EntrezGene | 18986 | ||||||||
| UniProt ID | PO2F1_MOUSE | ||||||||
| UniProt AC | P25425 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 63.116 | 40.892 | 26.278 | 79.715 |
| 02 | 188.107 | 4.963 | 11.857 | 5.074 |
| 03 | 10.147 | 6.397 | 12.904 | 180.551 |
| 04 | 6.728 | 3.254 | 182.04 | 17.978 |
| 05 | 22.665 | 141.14 | 16.066 | 30.129 |
| 06 | 164.614 | 7.996 | 1.048 | 36.342 |
| 07 | 176.498 | 1.351 | 15.689 | 16.461 |
| 08 | 184.136 | 2.206 | 14.338 | 9.32 |
| 09 | 30.634 | 9.789 | 29.2 | 140.377 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.18 | -0.243 | -0.668 | 0.409 |
| 02 | 1.258 | -2.145 | -1.406 | -2.128 |
| 03 | -1.545 | -1.94 | -1.33 | 1.217 |
| 04 | -1.898 | -2.462 | 1.226 | -1.025 |
| 05 | -0.808 | 0.973 | -1.129 | -0.537 |
| 06 | 1.126 | -1.752 | -3.117 | -0.357 |
| 07 | 1.195 | -2.997 | -1.151 | -1.107 |
| 08 | 1.237 | -2.721 | -1.234 | -1.62 |
| 09 | -0.521 | -1.577 | -0.567 | 0.968 |