Model info
| Transcription factor | PLAGL1 | ||||||||
| Model | PLAL1_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 10 | ||||||||
| Quality | D | ||||||||
| Consensus | vRGGGGGCCY | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 12 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | PLAG factors{2.3.3.25} | ||||||||
| HGNC | 9046 | ||||||||
| EntrezGene | 5325 | ||||||||
| UniProt ID | PLAL1_HUMAN | ||||||||
| UniProt AC | Q9UM63 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.117 | 7.294 | 2.117 | 0.471 |
| 02 | 4.115 | 0.0 | 7.062 | 0.823 |
| 03 | 0.0 | 0.0 | 9.531 | 2.469 |
| 04 | 1.646 | 0.0 | 10.354 | 0.0 |
| 05 | 0.823 | 0.0 | 11.177 | 0.0 |
| 06 | 0.0 | 0.0 | 12.0 | 0.0 |
| 07 | 0.0 | 0.0 | 12.0 | 0.0 |
| 08 | 0.0 | 11.177 | 0.0 | 0.823 |
| 09 | 0.823 | 10.354 | 0.0 | 0.823 |
| 10 | 0.823 | 7.062 | 1.646 | 2.469 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.279 | 0.782 | -0.279 | -1.198 |
| 02 | 0.268 | -1.763 | 0.752 | -0.919 |
| 03 | -1.763 | -1.763 | 1.031 | -0.159 |
| 04 | -0.468 | -1.763 | 1.109 | -1.763 |
| 05 | -0.919 | -1.763 | 1.181 | -1.763 |
| 06 | -1.763 | -1.763 | 1.249 | -1.763 |
| 07 | -1.763 | -1.763 | 1.249 | -1.763 |
| 08 | -1.763 | 1.181 | -1.763 | -0.919 |
| 09 | -0.919 | 1.109 | -1.763 | -0.919 |
| 10 | -0.919 | 0.752 | -0.468 | -0.159 |