Model info
Transcription factorPbx3
ModelPBX3_MOUSE.H10MO.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length14
Quality
A
ConsensusbbbYSATTGGYddv
wAUC
Best AUC
Benchmark datasets
Aligned words1885
TF familyTALE-type homeo domain factors{3.1.4}
TF subfamilyPBX{3.1.4.4}
MGI97496
EntrezGene18516
UniProt IDPBX3_MOUSE
UniProt ACO35317
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.2681
0.0005 5.3851
0.0001 7.4591
PCM
ACGT
01202.184700.668314.819627.846
02135.557405.945512.668791.347
03113.088721.09330.884680.456
04115.094329.8340.2871360.306
0510.837394.5441338.816101.319
061801.7340.08.82934.955
070.057.538153.7121634.267
080.9540.014.41830.163
090.01.7121825.73218.074
10689.7890.4811155.2470.0
11240.749953.45645.487605.826
12335.907292.972357.974858.665
13332.538173.981957.016381.982
14425.073330.877790.546299.022
PWM
ACGT
01-0.820.416-0.380.307
02-1.215-0.1270.1050.538
03-1.3940.445-0.3310.387
04-1.376-0.334-2.3971.079
05-3.595-0.1561.063-1.502
061.359-5.507-3.767-2.532
07-5.507-2.054-1.0911.262
08-5.096-5.507-3.3481.375
09-5.507-4.861.372-3.145
100.401-5.2790.915-5.507
11-0.6470.724-2.280.271
12-0.316-0.452-0.2530.619
13-0.326-0.9690.727-0.188
14-0.082-0.3310.537-0.432