Model info
| Transcription factor | Pax6 | ||||||||
| Model | PAX6_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Consensus | TSAdGYGTRAM | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 165 | ||||||||
| TF family | Paired plus homeo domain{3.2.1} | ||||||||
| TF subfamily | PAX-4/6{3.2.1.2} | ||||||||
| MGI | 97490 | ||||||||
| EntrezGene | 18508 | ||||||||
| UniProt ID | PAX6_MOUSE | ||||||||
| UniProt AC | P63015 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 4.168 | 25.836 | 6.152 | 128.844 |
| 02 | 8.893 | 88.933 | 62.806 | 4.368 |
| 03 | 151.002 | 0.0 | 12.649 | 1.35 |
| 04 | 74.354 | 10.104 | 16.08 | 64.462 |
| 05 | 5.262 | 35.935 | 123.009 | 0.794 |
| 06 | 10.6 | 124.586 | 7.703 | 22.111 |
| 07 | 29.686 | 4.446 | 130.868 | 0.0 |
| 08 | 4.565 | 3.453 | 22.907 | 134.075 |
| 09 | 60.761 | 0.635 | 92.542 | 11.061 |
| 10 | 146.124 | 2.779 | 6.986 | 9.112 |
| 11 | 119.951 | 22.297 | 9.987 | 12.766 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -2.056 | -0.45 | -1.745 | 1.118 |
| 02 | -1.431 | 0.752 | 0.41 | -2.019 |
| 03 | 1.276 | -3.506 | -1.116 | -2.785 |
| 04 | 0.576 | -1.318 | -0.896 | 0.436 |
| 05 | -1.872 | -0.133 | 1.072 | -3.022 |
| 06 | -1.276 | 1.085 | -1.555 | -0.598 |
| 07 | -0.317 | -2.006 | 1.134 | -3.506 |
| 08 | -1.985 | -2.196 | -0.564 | 1.158 |
| 09 | 0.378 | -3.102 | 0.791 | -1.237 |
| 10 | 1.243 | -2.35 | -1.638 | -1.409 |
| 11 | 1.048 | -0.59 | -1.329 | -1.108 |