Model info
| Transcription factor | TP73 | ||||||||
| Model | P73_HUMAN.H10MO.S | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 12 | ||||||||
| Quality | S | ||||||||
| Consensus | nRKGCAdGTYbb | ||||||||
| wAUC | 0.7745847850106506 | ||||||||
| Best AUC | 0.8006965617974391 | ||||||||
| Benchmark datasets | 2 | ||||||||
| Aligned words | 15 | ||||||||
| TF family | p53-related factors{6.3.1} | ||||||||
| TF subfamily | p73{6.3.1.0.3} | ||||||||
| HGNC | 12003 | ||||||||
| EntrezGene | 7161 | ||||||||
| UniProt ID | P73_HUMAN | ||||||||
| UniProt AC | O15350 | ||||||||
| Comment | Secondary motif. | ||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1.795 | 1.795 | 7.692 | 3.718 |
| 02 | 2.308 | 1.154 | 9.744 | 1.795 |
| 03 | 1.154 | 0.0 | 10.897 | 2.949 |
| 04 | 5.769 | 0.0 | 9.231 | 0.0 |
| 05 | 1.154 | 13.846 | 0.0 | 0.0 |
| 06 | 15.0 | 0.0 | 0.0 | 0.0 |
| 07 | 4.103 | 1.282 | 4.872 | 4.744 |
| 08 | 0.0 | 1.282 | 13.718 | 0.0 |
| 09 | 0.0 | 6.538 | 0.0 | 8.462 |
| 10 | 0.0 | 8.462 | 0.641 | 5.897 |
| 11 | 1.154 | 4.744 | 2.949 | 6.154 |
| 12 | 1.923 | 3.205 | 5.513 | 4.359 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.583 | -0.583 | 0.637 | -0.007 |
| 02 | -0.394 | -0.883 | 0.856 | -0.583 |
| 03 | -0.883 | -1.878 | 0.961 | -0.2 |
| 04 | 0.376 | -1.878 | 0.806 | -1.878 |
| 05 | -0.883 | 1.188 | -1.878 | -1.878 |
| 06 | 1.264 | -1.878 | -1.878 | -1.878 |
| 07 | 0.077 | -0.815 | 0.226 | 0.202 |
| 08 | -1.878 | -0.815 | 1.179 | -1.878 |
| 09 | -1.878 | 0.489 | -1.878 | 0.725 |
| 10 | -1.878 | 0.725 | -1.212 | 0.395 |
| 11 | -0.883 | 0.202 | -0.2 | 0.434 |
| 12 | -0.532 | -0.131 | 0.335 | 0.129 |