Model info
| Transcription factor | TP73 | ||||||||
| Model | P73_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 20 | ||||||||
| Quality | A | ||||||||
| Consensus | ddRCRWGYYKSdRCWWGYhb | ||||||||
| wAUC | 0.9845253974886737 | ||||||||
| Best AUC | 0.9930862967716575 | ||||||||
| Benchmark datasets | 2 | ||||||||
| Aligned words | 501 | ||||||||
| TF family | p53-related factors{6.3.1} | ||||||||
| TF subfamily | p73{6.3.1.0.3} | ||||||||
| HGNC | 12003 | ||||||||
| EntrezGene | 7161 | ||||||||
| UniProt ID | P73_HUMAN | ||||||||
| UniProt AC | O15350 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 135.177 | 64.665 | 230.344 | 69.815 |
| 02 | 109.221 | 26.885 | 281.681 | 82.213 |
| 03 | 174.456 | 5.858 | 300.021 | 19.664 |
| 04 | 3.922 | 478.003 | 8.839 | 9.236 |
| 05 | 368.624 | 40.925 | 57.334 | 33.117 |
| 06 | 139.408 | 7.046 | 74.102 | 279.444 |
| 07 | 0.939 | 0.895 | 497.22 | 0.946 |
| 08 | 38.105 | 185.893 | 23.589 | 252.413 |
| 09 | 39.974 | 276.381 | 10.815 | 172.83 |
| 10 | 92.642 | 7.189 | 121.223 | 278.946 |
| 11 | 35.997 | 68.435 | 378.383 | 17.185 |
| 12 | 122.273 | 54.711 | 245.011 | 78.005 |
| 13 | 226.952 | 1.783 | 230.835 | 40.43 |
| 14 | 0.986 | 497.061 | 0.933 | 1.02 |
| 15 | 275.277 | 55.359 | 7.051 | 162.312 |
| 16 | 58.178 | 31.666 | 57.696 | 352.46 |
| 17 | 14.648 | 1.197 | 483.163 | 0.992 |
| 18 | 65.675 | 222.755 | 13.948 | 197.622 |
| 19 | 89.463 | 246.889 | 34.267 | 129.38 |
| 20 | 69.594 | 136.242 | 99.871 | 194.293 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.077 | -0.648 | 0.606 | -0.573 |
| 02 | -0.133 | -1.493 | 0.806 | -0.413 |
| 03 | 0.33 | -2.838 | 0.868 | -1.786 |
| 04 | -3.14 | 1.332 | -2.5 | -2.462 |
| 05 | 1.073 | -1.092 | -0.765 | -1.295 |
| 06 | 0.108 | -2.689 | -0.514 | 0.798 |
| 07 | -3.927 | -3.945 | 1.371 | -3.925 |
| 08 | -1.16 | 0.393 | -1.616 | 0.697 |
| 09 | -1.114 | 0.787 | -2.326 | 0.321 |
| 10 | -0.295 | -2.672 | -0.03 | 0.796 |
| 11 | -1.215 | -0.592 | 1.099 | -1.91 |
| 12 | -0.022 | -0.811 | 0.667 | -0.464 |
| 13 | 0.591 | -3.636 | 0.608 | -1.103 |
| 14 | -3.909 | 1.371 | -3.93 | -3.895 |
| 15 | 0.783 | -0.799 | -2.688 | 0.258 |
| 16 | -0.751 | -1.338 | -0.759 | 1.029 |
| 17 | -2.056 | -3.829 | 1.343 | -3.906 |
| 18 | -0.633 | 0.572 | -2.1 | 0.454 |
| 19 | -0.33 | 0.675 | -1.262 | 0.034 |
| 20 | -0.576 | 0.085 | -0.221 | 0.437 |