Model info
Transcription factorOtx1
ModelOTX1_MOUSE.H10MO.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length8
Quality
D
ConsensusnGGATTAn
wAUC
Best AUC
Benchmark datasets
Aligned words8
TF familyPaired-related HD factors{3.1.3}
TF subfamilyOTX{3.1.3.17}
MGI97450
EntrezGene18423
UniProt IDOTX1_MOUSE
UniProt ACP80205
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.9401
0.0005 5.6372
0.0001 6.7172
PCM
ACGT
013.6551.4481.4481.448
021.2410.05.9310.828
030.00.08.00.0
045.3792.6210.00.0
050.00.00.08.0
060.00.00.08.0
078.00.00.00.0
082.2762.2762.8280.621
PWM
ACGT
010.505-0.247-0.247-0.247
02-0.358-1.5780.94-0.626
03-1.578-1.5781.218-1.578
040.8510.22-1.578-1.578
05-1.578-1.578-1.5781.218
06-1.578-1.578-1.5781.218
071.218-1.578-1.578-1.578
080.1040.1040.284-0.793