Transcription factor | Otx1 | ||||||||
Model | OTX1_MOUSE.H10MO.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 8 | ||||||||
Quality | D | ||||||||
Consensus | nGGATTAn | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 8 | ||||||||
TF family | Paired-related HD factors{3.1.3} | ||||||||
TF subfamily | OTX{3.1.3.17} | ||||||||
MGI | 97450 | ||||||||
EntrezGene | 18423 | ||||||||
UniProt ID | OTX1_MOUSE | ||||||||
UniProt AC | P80205 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 3.655 | 1.448 | 1.448 | 1.448 |
02 | 1.241 | 0.0 | 5.931 | 0.828 |
03 | 0.0 | 0.0 | 8.0 | 0.0 |
04 | 5.379 | 2.621 | 0.0 | 0.0 |
05 | 0.0 | 0.0 | 0.0 | 8.0 |
06 | 0.0 | 0.0 | 0.0 | 8.0 |
07 | 8.0 | 0.0 | 0.0 | 0.0 |
08 | 2.276 | 2.276 | 2.828 | 0.621 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.505 | -0.247 | -0.247 | -0.247 |
02 | -0.358 | -1.578 | 0.94 | -0.626 |
03 | -1.578 | -1.578 | 1.218 | -1.578 |
04 | 0.851 | 0.22 | -1.578 | -1.578 |
05 | -1.578 | -1.578 | -1.578 | 1.218 |
06 | -1.578 | -1.578 | -1.578 | 1.218 |
07 | 1.218 | -1.578 | -1.578 | -1.578 |
08 | 0.104 | 0.104 | 0.284 | -0.793 |