Model info
| Transcription factor | Onecut2 | ||||||||
| Model | ONEC2_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 21 | ||||||||
| Quality | D | ||||||||
| Consensus | RKvhYdTbATKGATTWTWTTW | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 7 | ||||||||
| TF family | HD-CUT factors{3.1.9} | ||||||||
| TF subfamily | ONECUT{3.1.9.1} | ||||||||
| MGI | 1891408 | ||||||||
| EntrezGene | 225631 | ||||||||
| UniProt ID | ONEC2_MOUSE | ||||||||
| UniProt AC | Q6XBJ3 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.078 | 0.0 | 2.953 | 1.969 |
| 02 | 0.984 | 0.0 | 2.078 | 3.938 |
| 03 | 0.984 | 3.063 | 2.078 | 0.875 |
| 04 | 1.859 | 1.094 | 0.984 | 3.063 |
| 05 | 0.984 | 1.094 | 0.984 | 3.938 |
| 06 | 0.984 | 0.875 | 3.172 | 1.969 |
| 07 | 3.172 | 0.0 | 0.0 | 3.828 |
| 08 | 0.0 | 0.984 | 0.984 | 5.031 |
| 09 | 7.0 | 0.0 | 0.0 | 0.0 |
| 10 | 0.0 | 0.0 | 0.0 | 7.0 |
| 11 | 0.0 | 1.094 | 1.969 | 3.938 |
| 12 | 1.094 | 0.0 | 5.906 | 0.0 |
| 13 | 7.0 | 0.0 | 0.0 | 0.0 |
| 14 | 0.0 | 1.969 | 0.0 | 5.031 |
| 15 | 0.0 | 0.0 | 0.0 | 7.0 |
| 16 | 1.969 | 0.875 | 0.0 | 4.156 |
| 17 | 1.969 | 0.0 | 0.0 | 5.031 |
| 18 | 1.969 | 0.0 | 0.984 | 4.047 |
| 19 | 0.0 | 2.953 | 0.0 | 4.047 |
| 20 | 0.0 | 3.063 | 0.0 | 3.938 |
| 21 | 1.859 | 1.094 | 0.0 | 4.047 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.137 | -1.525 | 0.43 | 0.093 |
| 02 | -0.419 | -1.525 | 0.137 | 0.682 |
| 03 | -0.419 | 0.462 | 0.137 | -0.496 |
| 04 | 0.048 | -0.347 | -0.419 | 0.462 |
| 05 | -0.419 | -0.347 | -0.419 | 0.682 |
| 06 | -0.419 | -0.496 | 0.492 | 0.093 |
| 07 | 0.492 | -1.525 | -1.525 | 0.657 |
| 08 | -1.525 | -0.419 | -0.419 | 0.903 |
| 09 | 1.208 | -1.525 | -1.525 | -1.525 |
| 10 | -1.525 | -1.525 | -1.525 | 1.208 |
| 11 | -1.525 | -0.347 | 0.093 | 0.682 |
| 12 | -0.347 | -1.525 | 1.05 | -1.525 |
| 13 | 1.208 | -1.525 | -1.525 | -1.525 |
| 14 | -1.525 | 0.093 | -1.525 | 0.903 |
| 15 | -1.525 | -1.525 | -1.525 | 1.208 |
| 16 | 0.093 | -0.496 | -1.525 | 0.73 |
| 17 | 0.093 | -1.525 | -1.525 | 0.903 |
| 18 | 0.093 | -1.525 | -0.419 | 0.707 |
| 19 | -1.525 | 0.43 | -1.525 | 0.707 |
| 20 | -1.525 | 0.462 | -1.525 | 0.682 |
| 21 | 0.048 | -0.347 | -1.525 | 0.707 |