Transcription factor | ONECUT2 | ||||||||
Model | ONEC2_HUMAN.H10MO.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 21 | ||||||||
Quality | D | ||||||||
Consensus | RKvhYdTbATKGATTWTWTTW | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 7 | ||||||||
TF family | HD-CUT factors{3.1.9} | ||||||||
TF subfamily | ONECUT{3.1.9.1} | ||||||||
HGNC | 8139 | ||||||||
EntrezGene | 9480 | ||||||||
UniProt ID | ONEC2_HUMAN | ||||||||
UniProt AC | O95948 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 2.078 | 0.0 | 2.953 | 1.969 |
02 | 0.984 | 0.0 | 2.078 | 3.938 |
03 | 0.984 | 3.063 | 2.078 | 0.875 |
04 | 1.859 | 1.094 | 0.984 | 3.063 |
05 | 0.984 | 1.094 | 0.984 | 3.938 |
06 | 0.984 | 0.875 | 3.172 | 1.969 |
07 | 3.172 | 0.0 | 0.0 | 3.828 |
08 | 0.0 | 0.984 | 0.984 | 5.031 |
09 | 7.0 | 0.0 | 0.0 | 0.0 |
10 | 0.0 | 0.0 | 0.0 | 7.0 |
11 | 0.0 | 1.094 | 1.969 | 3.938 |
12 | 1.094 | 0.0 | 5.906 | 0.0 |
13 | 7.0 | 0.0 | 0.0 | 0.0 |
14 | 0.0 | 1.969 | 0.0 | 5.031 |
15 | 0.0 | 0.0 | 0.0 | 7.0 |
16 | 1.969 | 0.875 | 0.0 | 4.156 |
17 | 1.969 | 0.0 | 0.0 | 5.031 |
18 | 1.969 | 0.0 | 0.984 | 4.047 |
19 | 0.0 | 2.953 | 0.0 | 4.047 |
20 | 0.0 | 3.063 | 0.0 | 3.938 |
21 | 1.859 | 1.094 | 0.0 | 4.047 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.137 | -1.525 | 0.43 | 0.093 |
02 | -0.419 | -1.525 | 0.137 | 0.682 |
03 | -0.419 | 0.462 | 0.137 | -0.496 |
04 | 0.048 | -0.347 | -0.419 | 0.462 |
05 | -0.419 | -0.347 | -0.419 | 0.682 |
06 | -0.419 | -0.496 | 0.492 | 0.093 |
07 | 0.492 | -1.525 | -1.525 | 0.657 |
08 | -1.525 | -0.419 | -0.419 | 0.903 |
09 | 1.208 | -1.525 | -1.525 | -1.525 |
10 | -1.525 | -1.525 | -1.525 | 1.208 |
11 | -1.525 | -0.347 | 0.093 | 0.682 |
12 | -0.347 | -1.525 | 1.05 | -1.525 |
13 | 1.208 | -1.525 | -1.525 | -1.525 |
14 | -1.525 | 0.093 | -1.525 | 0.903 |
15 | -1.525 | -1.525 | -1.525 | 1.208 |
16 | 0.093 | -0.496 | -1.525 | 0.73 |
17 | 0.093 | -1.525 | -1.525 | 0.903 |
18 | 0.093 | -1.525 | -0.419 | 0.707 |
19 | -1.525 | 0.43 | -1.525 | 0.707 |
20 | -1.525 | 0.462 | -1.525 | 0.682 |
21 | 0.048 | -0.347 | -1.525 | 0.707 |