Model info
| Transcription factor | OLIG2 | ||||||||
| Model | OLIG2_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Consensus | dMMATATGKTb | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 3045 | ||||||||
| TF family | Tal-related factors{1.2.3} | ||||||||
| TF subfamily | Neurogenin / Atonal-like factors{1.2.3.4} | ||||||||
| HGNC | 9398 | ||||||||
| EntrezGene | 10215 | ||||||||
| UniProt ID | OLIG2_HUMAN | ||||||||
| UniProt AC | Q13516 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1351.116 | 234.148 | 838.258 | 304.292 |
| 02 | 492.393 | 1611.338 | 462.896 | 161.188 |
| 03 | 532.67 | 1955.013 | 128.842 | 111.288 |
| 04 | 2552.362 | 22.102 | 114.027 | 39.324 |
| 05 | 21.781 | 11.049 | 62.068 | 2632.917 |
| 06 | 2661.838 | 4.544 | 55.909 | 5.524 |
| 07 | 22.747 | 100.739 | 32.181 | 2572.148 |
| 08 | 26.664 | 28.611 | 2627.385 | 45.155 |
| 09 | 58.595 | 201.192 | 1046.427 | 1421.599 |
| 10 | 56.709 | 127.532 | 97.962 | 2445.612 |
| 11 | 387.969 | 590.657 | 495.443 | 1253.746 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.682 | -1.063 | 0.206 | -0.803 |
| 02 | -0.325 | 0.858 | -0.386 | -1.433 |
| 03 | -0.246 | 1.051 | -1.654 | -1.798 |
| 04 | 1.318 | -3.346 | -1.774 | -2.807 |
| 05 | -3.36 | -3.961 | -2.368 | 1.349 |
| 06 | 1.36 | -4.653 | -2.469 | -4.513 |
| 07 | -3.32 | -1.896 | -2.997 | 1.325 |
| 08 | -3.173 | -3.107 | 1.347 | -2.675 |
| 09 | -2.424 | -1.214 | 0.427 | 0.733 |
| 10 | -2.456 | -1.664 | -1.923 | 1.275 |
| 11 | -0.562 | -0.143 | -0.318 | 0.608 |