Model info
| Transcription factor | Nr2f6 | ||||||||
| Model | NR2F6_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 18 | ||||||||
| Quality | D | ||||||||
| Consensus | RGSWMAAAGdnSAnnKdR | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 11 | ||||||||
| TF family | RXR-related receptors (NR2){2.1.3} | ||||||||
| TF subfamily | COUP-like receptors (NR2F){2.1.3.5} | ||||||||
| MGI | 1352453 | ||||||||
| EntrezGene | 13864 | ||||||||
| UniProt ID | NR2F6_MOUSE | ||||||||
| UniProt AC | P43136 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 5.23 | 0.27 | 3.181 | 2.319 |
| 02 | 1.941 | 0.0 | 9.059 | 0.0 |
| 03 | 0.971 | 3.02 | 7.01 | 0.0 |
| 04 | 4.961 | 0.0 | 2.049 | 3.99 |
| 05 | 2.049 | 7.98 | 0.971 | 0.0 |
| 06 | 11.0 | 0.0 | 0.0 | 0.0 |
| 07 | 10.029 | 0.0 | 0.971 | 0.0 |
| 08 | 7.873 | 0.0 | 3.127 | 0.0 |
| 09 | 0.0 | 0.0 | 11.0 | 0.0 |
| 10 | 1.941 | 1.078 | 3.02 | 4.961 |
| 11 | 2.049 | 2.049 | 1.941 | 4.961 |
| 12 | 1.941 | 7.01 | 2.049 | 0.0 |
| 13 | 10.029 | 0.0 | 0.971 | 0.0 |
| 14 | 3.02 | 3.02 | 2.049 | 2.912 |
| 15 | 2.049 | 3.127 | 1.941 | 3.882 |
| 16 | 2.049 | 0.0 | 3.99 | 4.961 |
| 17 | 2.912 | 0.971 | 5.176 | 1.941 |
| 18 | 5.931 | 2.049 | 3.02 | 0.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.554 | -1.349 | 0.121 | -0.138 |
| 02 | -0.276 | -1.721 | 1.059 | -1.721 |
| 03 | -0.758 | 0.077 | 0.821 | -1.721 |
| 04 | 0.507 | -1.721 | -0.235 | 0.315 |
| 05 | -0.235 | 0.941 | -0.758 | -1.721 |
| 06 | 1.242 | -1.721 | -1.721 | -1.721 |
| 07 | 1.155 | -1.721 | -0.758 | -1.721 |
| 08 | 0.928 | -1.721 | 0.107 | -1.721 |
| 09 | -1.721 | -1.721 | 1.242 | -1.721 |
| 10 | -0.276 | -0.691 | 0.077 | 0.507 |
| 11 | -0.235 | -0.235 | -0.276 | 0.507 |
| 12 | -0.276 | 0.821 | -0.235 | -1.721 |
| 13 | 1.155 | -1.721 | -0.758 | -1.721 |
| 14 | 0.077 | 0.077 | -0.235 | 0.047 |
| 15 | -0.235 | 0.107 | -0.276 | 0.291 |
| 16 | -0.235 | -1.721 | 0.315 | 0.507 |
| 17 | 0.047 | -0.758 | 0.545 | -0.276 |
| 18 | 0.668 | -0.235 | 0.077 | -1.721 |