Model info
| Transcription factor | NR2C2 | ||||||||
| Model | NR2C2_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 13 | ||||||||
| Quality | A | ||||||||
| Consensus | RRSbSARAGGKMR | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 2062 | ||||||||
| TF family | RXR-related receptors (NR2){2.1.3} | ||||||||
| TF subfamily | Testicular receptors (NR2C){2.1.3.4} | ||||||||
| HGNC | 7972 | ||||||||
| EntrezGene | 7182 | ||||||||
| UniProt ID | NR2C2_HUMAN | ||||||||
| UniProt AC | P49116 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 986.39 | 173.566 | 797.801 | 100.243 |
| 02 | 408.386 | 88.37 | 1413.889 | 147.355 |
| 03 | 200.305 | 246.372 | 1441.79 | 169.533 |
| 04 | 208.846 | 213.688 | 460.567 | 1174.899 |
| 05 | 253.691 | 1324.429 | 334.901 | 144.979 |
| 06 | 1669.818 | 104.689 | 264.681 | 18.813 |
| 07 | 1168.812 | 121.664 | 742.502 | 25.022 |
| 08 | 1764.479 | 8.364 | 218.652 | 66.504 |
| 09 | 99.292 | 27.117 | 1828.759 | 102.832 |
| 10 | 62.105 | 83.427 | 1675.895 | 236.573 |
| 11 | 127.539 | 219.986 | 442.56 | 1267.914 |
| 12 | 290.463 | 1481.283 | 206.814 | 79.439 |
| 13 | 1631.063 | 66.865 | 251.831 | 108.241 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.649 | -1.079 | 0.437 | -1.62 |
| 02 | -0.23 | -1.744 | 1.009 | -1.241 |
| 03 | -0.938 | -0.732 | 1.028 | -1.103 |
| 04 | -0.896 | -0.873 | -0.11 | 0.824 |
| 05 | -0.703 | 0.943 | -0.427 | -1.257 |
| 06 | 1.175 | -1.578 | -0.661 | -3.216 |
| 07 | 0.818 | -1.43 | 0.366 | -2.954 |
| 08 | 1.23 | -3.918 | -0.851 | -2.021 |
| 09 | -1.63 | -2.879 | 1.266 | -1.595 |
| 10 | -2.088 | -1.8 | 1.178 | -0.773 |
| 11 | -1.384 | -0.845 | -0.15 | 0.9 |
| 12 | -0.569 | 1.055 | -0.906 | -1.848 |
| 13 | 1.151 | -2.016 | -0.711 | -1.545 |