Transcription factor | Nr2c1 | ||||||||
Model | NR2C1_MOUSE.H10MO.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 13 | ||||||||
Quality | C | ||||||||
Consensus | RbYvARAGGTCAn | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 19 | ||||||||
TF family | RXR-related receptors (NR2){2.1.3} | ||||||||
TF subfamily | Testicular receptors (NR2C){2.1.3.4} | ||||||||
MGI | 1352465 | ||||||||
EntrezGene | 22025 | ||||||||
UniProt ID | NR2C1_MOUSE | ||||||||
UniProt AC | Q505F1 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 3.949 | 2.028 | 11.101 | 0.961 |
02 | 0.961 | 5.978 | 8.006 | 3.096 |
03 | 1.921 | 10.034 | 0.961 | 5.124 |
04 | 4.803 | 8.112 | 4.056 | 1.067 |
05 | 12.169 | 0.0 | 5.871 | 0.0 |
06 | 4.163 | 2.882 | 9.927 | 1.067 |
07 | 17.079 | 0.0 | 0.961 | 0.0 |
08 | 0.0 | 0.0 | 18.039 | 0.0 |
09 | 0.0 | 0.0 | 13.983 | 4.056 |
10 | 0.0 | 0.0 | 0.0 | 18.039 |
11 | 0.0 | 18.039 | 0.0 | 0.0 |
12 | 16.972 | 0.0 | 0.0 | 1.067 |
13 | 1.681 | 4.777 | 6.805 | 4.777 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.113 | -0.643 | 0.815 | -1.134 |
02 | -1.134 | 0.247 | 0.512 | -0.315 |
03 | -0.683 | 0.721 | -1.134 | 0.111 |
04 | 0.055 | 0.524 | -0.091 | -1.072 |
05 | 0.902 | -1.979 | 0.231 | -1.979 |
06 | -0.069 | -0.373 | 0.711 | -1.072 |
07 | 1.224 | -1.979 | -1.134 | -1.979 |
08 | -1.979 | -1.979 | 1.277 | -1.979 |
09 | -1.979 | -1.979 | 1.033 | -0.091 |
10 | -1.979 | -1.979 | -1.979 | 1.277 |
11 | -1.979 | 1.277 | -1.979 | -1.979 |
12 | 1.218 | -1.979 | -1.979 | -1.072 |
13 | -0.778 | 0.05 | 0.364 | 0.05 |