Model info
| Transcription factor | NR0B1 | ||||||||
| Model | NR0B1_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 10 | ||||||||
| Quality | D | ||||||||
| Consensus | SCGKGGRASA | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 9 | ||||||||
| TF family | DAX-related receptors (NR0){2.1.7} | ||||||||
| TF subfamily | DAX1 (NR0B1){2.1.7.0.1} | ||||||||
| HGNC | 7960 | ||||||||
| EntrezGene | 190 | ||||||||
| UniProt ID | NR0B1_HUMAN | ||||||||
| UniProt AC | P51843 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.207 | 2.22 | 5.536 | 1.036 |
| 02 | 3.079 | 5.921 | 0.0 | 0.0 |
| 03 | 0.947 | 0.0 | 8.053 | 0.0 |
| 04 | 1.066 | 0.0 | 3.197 | 4.737 |
| 05 | 0.0 | 0.0 | 9.0 | 0.0 |
| 06 | 0.0 | 1.776 | 7.224 | 0.0 |
| 07 | 1.895 | 0.0 | 6.158 | 0.947 |
| 08 | 6.868 | 1.066 | 1.066 | 0.0 |
| 09 | 1.776 | 3.316 | 3.908 | 0.0 |
| 10 | 5.092 | 0.0 | 3.908 | 0.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.308 | -0.011 | 0.777 | -0.568 |
| 02 | 0.259 | 0.838 | -1.628 | -1.628 |
| 03 | -0.626 | -1.628 | 1.123 | -1.628 |
| 04 | -0.55 | -1.628 | 0.291 | 0.636 |
| 05 | -1.628 | -1.628 | 1.227 | -1.628 |
| 06 | -1.628 | -0.185 | 1.021 | -1.628 |
| 07 | -0.136 | -1.628 | 0.874 | -0.626 |
| 08 | 0.975 | -0.55 | -0.55 | -1.628 |
| 09 | -0.185 | 0.323 | 0.465 | -1.628 |
| 10 | 0.701 | -1.628 | 0.465 | -1.628 |