Model info
Transcription factorNKX6-1
ModelNKX61_HUMAN.H10MO.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHT-SELEX
Model length19
Quality
D
ConsensushdWTAATKRbnhWWWWWdd
wAUC
Best AUC
Benchmark datasets
Aligned words46995
TF familyNK-related factors{3.1.2}
TF subfamilyNK-6{3.1.2.19}
HGNC7839
EntrezGene4825
UniProt IDNKX61_HUMAN
UniProt ACP78426
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.4651
0.0005 4.5861
0.0001 6.8671
PCM
ACGT
0118730.4979305.3427379.36511322.472
0219487.747552.6517754.2811943.006
038479.6213291.4054231.60630735.044
041580.8322122.4031498.28741536.154
0543164.074376.1472590.451607.003
0645125.5122.98570.6321518.549
071576.26384.725190.08744886.601
081801.993586.70316108.74228240.238
0932037.231451.14213976.672272.631
102745.54924750.36214208.0345033.731
116852.5716966.26513290.1959628.646
126922.01811215.2013021.25825579.198
1311716.4154809.8811636.45928574.922
1414044.4862630.34670.92529391.926
1523675.087850.442847.75821364.389
1629451.8962211.452672.26714402.062
1717802.7911295.4133047.33424592.138
1810011.4752311.4188389.52326025.261
1919287.5674146.0959867.42113436.593
PWM
ACGT
010.472-0.228-0.459-0.031
020.511-0.436-0.410.022
03-0.321-1.266-1.0150.967
04-1.999-1.705-2.0521.268
051.307-3.429-1.506-2.953
061.351-6.121-5.071-2.039
07-2.002-4.896-4.1051.346
08-1.868-2.9870.3210.882
091.008-3.2490.179-3.748
10-1.4480.750.196-0.842
11-0.5330.3730.129-0.193
12-0.523-0.041-1.3520.783
130.003-0.887-1.9640.894
140.184-1.49-2.8540.922
150.706-2.617-2.620.603
160.924-1.664-2.8520.209
170.421-2.198-1.3430.744
18-0.154-1.619-0.3310.801
190.501-1.036-0.1690.14