Model info
Transcription factorNKX2-5
ModelNKX25_HUMAN.H10MO.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length7
Quality
C
ConsensusKbAAGTG
wAUC
Best AUC
Benchmark datasets
Aligned words60
TF familyNK-related factors{3.1.2}
TF subfamilyNK-4{3.1.2.17}
HGNC2488
EntrezGene1482
UniProt IDNKX25_HUMAN
UniProt ACP52952
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.0439
0.0005 5.7404
0.0001 7.5874
PCM
ACGT
016.9893.4899.83138.274
022.08526.0959.30421.099
0357.9420.00.6420.0
0453.6850.02.4062.492
050.00.64250.7867.155
061.770.00.80256.011
074.9840.052.7970.802
PWM
ACGT
01-0.671-1.246-0.3670.92
02-1.6190.549-0.4170.345
031.326-2.734-2.245-2.734
041.251-2.734-1.521-1.496
05-2.734-2.2451.196-0.651
06-1.726-2.734-2.1531.292
07-0.959-2.7341.234-2.153