Transcription factor | NKX2-1 | ||||||||
Model | NKX21_HUMAN.H10MO.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 10 | ||||||||
Quality | D | ||||||||
Consensus | bYSRAGdRbh | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 85 | ||||||||
TF family | NK-related factors{3.1.2} | ||||||||
TF subfamily | NK-2.1{3.1.2.14} | ||||||||
HGNC | 11825 | ||||||||
EntrezGene | 7080 | ||||||||
UniProt ID | NKX21_HUMAN | ||||||||
UniProt AC | P43699 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 7.993 | 40.41 | 23.477 | 13.451 |
02 | 9.803 | 20.497 | 3.231 | 51.801 |
03 | 0.139 | 53.499 | 18.966 | 12.727 |
04 | 58.29 | 5.152 | 19.523 | 2.367 |
05 | 85.332 | 0.0 | 0.0 | 0.0 |
06 | 1.003 | 0.0 | 84.329 | 0.0 |
07 | 11.836 | 3.147 | 31.999 | 38.349 |
08 | 14.148 | 0.0 | 59.041 | 12.142 |
09 | 5.264 | 44.587 | 16.403 | 19.077 |
10 | 17.267 | 24.062 | 11.028 | 32.974 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.902 | 0.615 | 0.091 | -0.433 |
02 | -0.721 | -0.038 | -1.643 | 0.858 |
03 | -2.887 | 0.889 | -0.111 | -0.484 |
04 | 0.973 | -1.276 | -0.084 | -1.864 |
05 | 1.348 | -3.005 | -3.005 | -3.005 |
06 | -2.362 | -3.005 | 1.337 | -3.005 |
07 | -0.55 | -1.662 | 0.389 | 0.564 |
08 | -0.386 | -3.005 | 0.986 | -0.527 |
09 | -1.259 | 0.711 | -0.248 | -0.106 |
10 | -0.2 | 0.115 | -0.615 | 0.418 |