Model info
| Transcription factor | Nfyc | ||||||||
| Model | NFYC_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 14 | ||||||||
| Quality | B | ||||||||
| Consensus | hRRCCAATSRSnvv | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 26 | ||||||||
| TF family | Heteromeric CCAAT-binding factors{4.2.1} | ||||||||
| TF subfamily | NF-YC{4.2.1.0.3} | ||||||||
| MGI | 107901 | ||||||||
| EntrezGene | 18046 | ||||||||
| UniProt ID | NFYC_MOUSE | ||||||||
| UniProt AC | P70353 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 3.332 | 11.955 | 2.678 | 8.035 |
| 02 | 17.638 | 0.784 | 5.618 | 1.96 |
| 03 | 6.141 | 2.874 | 15.156 | 1.829 |
| 04 | 0.0 | 24.563 | 0.653 | 0.784 |
| 05 | 0.0 | 26.0 | 0.0 | 0.0 |
| 06 | 24.04 | 1.176 | 0.0 | 0.784 |
| 07 | 25.216 | 0.784 | 0.0 | 0.0 |
| 08 | 1.437 | 0.0 | 2.09 | 22.472 |
| 09 | 0.653 | 13.457 | 7.97 | 3.92 |
| 10 | 17.377 | 2.352 | 4.181 | 2.09 |
| 11 | 2.352 | 6.925 | 15.286 | 1.437 |
| 12 | 7.055 | 10.844 | 7.055 | 1.045 |
| 13 | 4.312 | 5.357 | 12.151 | 4.181 |
| 14 | 4.148 | 10.42 | 8.068 | 3.364 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.568 | 0.557 | -0.739 | 0.191 |
| 02 | 0.925 | -1.521 | -0.128 | -0.969 |
| 03 | -0.05 | -0.685 | 0.781 | -1.018 |
| 04 | -2.195 | 1.244 | -1.606 | -1.521 |
| 05 | -2.195 | 1.299 | -2.195 | -2.195 |
| 06 | 1.223 | -1.302 | -2.195 | -1.521 |
| 07 | 1.269 | -1.521 | -2.195 | -2.195 |
| 08 | -1.178 | -2.195 | -0.923 | 1.158 |
| 09 | -1.606 | 0.668 | 0.183 | -0.435 |
| 10 | 0.911 | -0.837 | -0.381 | -0.923 |
| 11 | -0.837 | 0.056 | 0.789 | -1.178 |
| 12 | 0.073 | 0.466 | 0.073 | -1.369 |
| 13 | -0.356 | -0.17 | 0.572 | -0.381 |
| 14 | -0.388 | 0.429 | 0.194 | -0.56 |