Model info
Transcription factorNfya
ModelNFYA_MOUSE.H10DI.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
OriginChIP-Seq
Model length23
Quality
C
ConsensusbdRMvvhhhhvRMMAATSRKARv
wAUC
0.8070458887767631
Best AUC
0.8070458887767631
Benchmark datasets1
Aligned words579
TF familyHeteromeric CCAAT-binding factors{4.2.1}
TF subfamilyNF-YA (CP1A, CBF-B){4.2.1.0.1}
MGI97316
EntrezGene18044
UniProt IDNFYA_MOUSE
UniProt ACP23708
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.0281
0.0005 6.2561
0.0001 10.9041
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
016.5733.71922.5094.57330.2995.42320.30144.37510.425.47921.585.589.63910.335130.0471.898
0217.098.39927.4433.9989.1687.3784.4643.947135.36425.50921.50612.05936.0884.6737.598.075
03168.27313.65312.9032.88210.15816.5610.8698.37218.46821.21615.6295.6896.64410.5336.3974.504
04127.59143.48320.66511.80417.09518.89413.73112.24117.46520.9814.6262.7262.9228.2897.5282.707
05131.3787.51522.4883.69417.53952.38612.6669.05515.33117.56.4437.2764.50210.9444.6819.352
0623.66122.22810.979111.88211.23955.794.45916.85714.15317.1853.62711.3131.82917.0512.897.607
076.46221.89516.7585.76727.44917.19613.80953.86.4575.5945.3694.53518.397110.54115.7792.943
0818.75319.4577.23413.32120.6755.5114.63624.40416.04317.4255.46712.7835.65912.0575.59513.734
0943.31188.1910.52249.1061.05116.2933.59933.5070.013.6233.7075.6023.62833.4223.7323.459
104.73233.3839.8740.052.09913.07679.9186.43414.540.9152.8753.22827.0324.36477.5472.73
1117.7974.65766.789.173.49134.56310.0223.66226.7465.712125.63312.1241.8113.1245.2542.203
124.62245.2220.00.07.31939.6891.0490.0109.90296.0320.8890.8671.3324.8630.00.966
13115.6145.4210.02.1383.873165.8870.036.0461.0490.8890.00.00.00.9660.00.867
14120.5360.00.00.0173.1630.00.00.00.00.00.00.039.0510.00.00.0
15322.2610.8686.6772.9440.00.00.00.00.00.00.00.00.00.00.00.0
162.69332.5116.429280.6280.00.00.00.8680.8750.9280.9583.9150.00.00.9481.996
170.00.8752.6930.00.033.4390.00.00.03.6124.7240.07.42892.044184.1153.82
181.8340.05.5940.072.95634.96620.1531.894163.8110.89825.7781.0462.0280.01.7920.0
1914.915.801193.63716.290.8982.6040.87531.4875.52211.1535.7480.8980.00.02.940.0
2014.9890.8663.6651.817.5790.96810.0840.924192.40124.01313.9182.8741.2745.5330.8790.988
21203.5362.7749.93610.09.1495.8599.217.16216.3440.9429.4051.8551.8270.03.7670.988
22139.63548.6332.7949.7963.764.9460.00.86613.91634.64617.5166.240.8492.80410.8585.493
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.115-1.6450.078-1.4560.371-1.297-0.0240.749-0.674-1.2870.036-1.27-0.749-0.6821.819-2.236
02-0.193-0.8820.273-1.579-0.798-1.006-1.478-1.5911.8590.2010.033-0.5330.544-1.435-0.979-0.919
032.076-0.412-0.467-1.875-0.699-0.223-0.633-0.885-0.1170.02-0.28-1.252-1.105-0.664-1.141-1.47
041.80.729-0.006-0.553-0.192-0.094-0.406-0.518-0.1710.009-1.445-1.924-1.863-0.894-0.986-1.93
051.829-0.9880.077-1.652-0.1670.913-0.485-0.81-0.299-0.169-1.134-1.019-1.47-0.627-1.434-0.778
060.1270.065-0.6241.669-0.6010.976-1.479-0.206-0.377-0.187-1.668-0.595-2.267-0.195-1.873-0.976
07-1.1320.051-0.212-1.2390.273-0.187-0.4010.94-1.132-1.268-1.306-1.463-0.121.657-0.271-1.856
08-0.102-0.065-1.024-0.4361.744-1.282-1.4430.157-0.254-0.174-1.289-0.4760.532-0.533-1.267-0.406
090.7251.432-0.6650.849-2.706-0.239-1.6750.47-4.066-0.414-1.648-1.266-1.6680.468-1.6430.119
10-1.4240.467-0.726-4.0660.908-0.4541.333-1.136-0.351-2.807-1.877-1.7740.258-1.4991.303-1.923
11-0.153-1.4391.155-0.797-1.7030.501-0.712-1.660.248-1.2481.784-0.527-2.276-1.803-1.326-2.11
12-1.4460.767-4.066-4.066-1.0130.638-2.707-4.0661.6511.516-2.827-2.845-2.5260.176-4.066-2.768
131.701-1.297-4.066-2.135-1.6092.061-4.0660.543-2.707-2.827-4.066-4.066-4.066-2.768-4.066-2.845
141.743-4.066-4.066-4.0662.104-4.066-4.066-4.066-4.066-4.066-4.066-4.0660.622-4.066-4.066-4.066
152.724-2.845-1.1-1.856-4.066-4.066-4.066-4.066-4.066-4.066-4.066-4.066-4.066-4.066-4.066-4.066
16-1.9350.441-1.1362.586-4.066-4.066-4.066-2.845-2.839-2.796-2.774-1.599-4.066-4.066-2.781-2.194
17-4.066-2.839-1.935-4.066-4.0660.468-4.066-4.066-4.066-1.672-1.425-4.066-0.9991.4742.165-1.621
18-2.265-4.066-1.267-4.0661.2430.513-0.031-2.2382.049-2.8210.211-2.709-2.18-4.066-2.284-4.066
19-0.327-0.2692.216-0.24-2.821-1.965-2.8390.409-1.28-0.6090.534-2.821-4.066-4.066-1.857-4.066
20-0.321-2.846-1.659-2.28-0.165-2.766-0.706-2.82.2090.141-0.393-1.8790.677-1.278-2.835-2.752
212.266-1.910.866-0.714-0.8-1.224-0.793-1.034-0.236-2.786-0.773-2.256-2.268-4.066-1.634-2.752
221.890.840.449-0.734-1.636-1.383-4.066-2.846-0.3930.504-0.168-1.165-2.86-1.899-0.634-1.285