Model info
Transcription factorNFYA
ModelNFYA_HUMAN.H10MO.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length13
Quality
A
ConsensusbRRCCAATSRSvd
wAUC
0.9470746139170148
Best AUC
0.9679835661655873
Benchmark datasets5
Aligned words1318
TF familyHeteromeric CCAAT-binding factors{4.2.1}
TF subfamilyNF-YA (CP1A, CBF-B){4.2.1.0.1}
HGNC7804
EntrezGene4800
UniProt IDNFYA_HUMAN
UniProt ACP23511
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.6111
0.0005 4.7661
0.0001 7.2551
PCM
ACGT
01124.082555.212270.482358.965
02631.659114.318511.92250.84
03481.89872.097665.36689.379
040.8291287.48216.8533.577
059.2071294.6584.1080.767
061287.056.0763.5812.035
071292.8336.3565.7573.796
0812.3117.53410.6331278.263
09112.811742.598388.46164.87
10817.41770.497401.80719.019
11150.942230.342836.81890.638
12534.653438.696244.26791.124
13501.58886.025528.017193.111
PWM
ACGT
01-0.9610.527-0.1890.092
020.655-1.0410.446-1.833
030.385-1.4930.707-1.283
04-4.8321.366-2.87-4.115
05-3.3981.371-4.021-4.855
061.366-3.733-4.114-3.169
071.37-3.698-3.774-4.075
08-3.149-3.563-3.2761.359
09-1.0540.8170.171-1.596
100.912-1.5150.204-2.76
11-0.767-0.3490.936-1.27
120.4890.292-0.29-1.264
130.425-1.3210.477-0.523