Transcription factor | Nfkb2 | ||||||||
Model | NFKB2_MOUSE.H10MO.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 11 | ||||||||
Quality | D | ||||||||
Consensus | bGAWWbYCCCW | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 11 | ||||||||
TF family | NF-kappaB-related factors{6.1.1} | ||||||||
TF subfamily | NF-kappaB p50 subunit-like factors{6.1.1.1} | ||||||||
MGI | 1099800 | ||||||||
EntrezGene | 18034 | ||||||||
UniProt ID | NFKB2_MOUSE | ||||||||
UniProt AC | Q9WTK5 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 0.0 | 2.146 | 6.707 | 2.146 |
02 | 4.293 | 0.0 | 6.707 | 0.0 |
03 | 9.927 | 0.0 | 0.0 | 1.073 |
04 | 7.78 | 0.0 | 1.073 | 2.146 |
05 | 2.146 | 1.073 | 0.0 | 7.78 |
06 | 1.073 | 3.89 | 3.22 | 2.817 |
07 | 1.073 | 3.89 | 0.0 | 6.037 |
08 | 0.0 | 9.927 | 1.073 | 0.0 |
09 | 1.073 | 9.927 | 0.0 | 0.0 |
10 | 1.744 | 9.256 | 0.0 | 0.0 |
11 | 2.482 | 0.335 | 1.409 | 6.774 |
A | C | G | T | |
---|---|---|---|---|
01 | -1.721 | -0.199 | 0.78 | -0.199 |
02 | 0.379 | -1.721 | 0.78 | -1.721 |
03 | 1.145 | -1.721 | -1.721 | -0.694 |
04 | 0.917 | -1.721 | -0.694 | -0.199 |
05 | -0.199 | -0.694 | -1.721 | 0.917 |
06 | -0.694 | 0.293 | 0.131 | 0.02 |
07 | -0.694 | 0.293 | -1.721 | 0.684 |
08 | -1.721 | 1.145 | -0.694 | -1.721 |
09 | -0.694 | 1.145 | -1.721 | -1.721 |
10 | -0.357 | 1.079 | -1.721 | -1.721 |
11 | -0.083 | -1.276 | -0.512 | 0.789 |