Model info
| Transcription factor | NFKB2 | ||||||||
| Model | NFKB2_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Consensus | bGAWWbYCCCW | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 11 | ||||||||
| TF family | NF-kappaB-related factors{6.1.1} | ||||||||
| TF subfamily | NF-kappaB p50 subunit-like factors{6.1.1.1} | ||||||||
| HGNC | 7795 | ||||||||
| EntrezGene | 4791 | ||||||||
| UniProt ID | NFKB2_HUMAN | ||||||||
| UniProt AC | Q00653 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.0 | 2.146 | 6.707 | 2.146 |
| 02 | 4.293 | 0.0 | 6.707 | 0.0 |
| 03 | 9.927 | 0.0 | 0.0 | 1.073 |
| 04 | 7.78 | 0.0 | 1.073 | 2.146 |
| 05 | 2.146 | 1.073 | 0.0 | 7.78 |
| 06 | 1.073 | 3.89 | 3.22 | 2.817 |
| 07 | 1.073 | 3.89 | 0.0 | 6.037 |
| 08 | 0.0 | 9.927 | 1.073 | 0.0 |
| 09 | 1.073 | 9.927 | 0.0 | 0.0 |
| 10 | 1.744 | 9.256 | 0.0 | 0.0 |
| 11 | 2.482 | 0.335 | 1.409 | 6.774 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.721 | -0.199 | 0.78 | -0.199 |
| 02 | 0.379 | -1.721 | 0.78 | -1.721 |
| 03 | 1.145 | -1.721 | -1.721 | -0.694 |
| 04 | 0.917 | -1.721 | -0.694 | -0.199 |
| 05 | -0.199 | -0.694 | -1.721 | 0.917 |
| 06 | -0.694 | 0.293 | 0.131 | 0.02 |
| 07 | -0.694 | 0.293 | -1.721 | 0.684 |
| 08 | -1.721 | 1.145 | -0.694 | -1.721 |
| 09 | -0.694 | 1.145 | -1.721 | -1.721 |
| 10 | -0.357 | 1.079 | -1.721 | -1.721 |
| 11 | -0.083 | -1.276 | -0.512 | 0.789 |