Model info
| Transcription factor | Nfil3 | ||||||||
| Model | NFIL3_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 14 | ||||||||
| Quality | C | ||||||||
| Consensus | vTTAYGTAAbbbvb | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 51 | ||||||||
| TF family | C/EBP-related{1.1.8} | ||||||||
| TF subfamily | PAR factors{1.1.8.2} | ||||||||
| MGI | 109495 | ||||||||
| EntrezGene | 18030 | ||||||||
| UniProt ID | NFIL3_MOUSE | ||||||||
| UniProt AC | O08750 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 14.07 | 9.907 | 24.08 | 2.943 |
| 02 | 2.943 | 0.0 | 0.933 | 47.123 |
| 03 | 0.933 | 0.0 | 4.953 | 45.113 |
| 04 | 49.963 | 0.0 | 0.0 | 1.037 |
| 05 | 0.0 | 21.137 | 1.867 | 27.996 |
| 06 | 7.897 | 0.0 | 43.103 | 0.0 |
| 07 | 0.0 | 1.97 | 0.0 | 49.03 |
| 08 | 51.0 | 0.0 | 0.0 | 0.0 |
| 09 | 50.067 | 0.0 | 0.0 | 0.933 |
| 10 | 0.933 | 16.08 | 10.84 | 23.147 |
| 11 | 6.963 | 8.04 | 20.89 | 15.107 |
| 12 | 7.897 | 18.09 | 8.973 | 16.04 |
| 13 | 21.033 | 18.984 | 6.963 | 4.02 |
| 14 | 7.897 | 10.05 | 12.993 | 20.06 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.092 | -0.232 | 0.602 | -1.252 |
| 02 | -1.252 | -2.637 | -1.969 | 1.254 |
| 03 | -1.969 | -2.637 | -0.839 | 1.211 |
| 04 | 1.311 | -2.637 | -2.637 | -1.917 |
| 05 | -2.637 | 0.477 | -1.573 | 0.747 |
| 06 | -0.436 | -2.637 | 1.166 | -2.637 |
| 07 | -2.637 | -1.537 | -2.637 | 1.292 |
| 08 | 1.331 | -2.637 | -2.637 | -2.637 |
| 09 | 1.313 | -2.637 | -2.637 | -1.969 |
| 10 | -1.969 | 0.217 | -0.15 | 0.564 |
| 11 | -0.547 | -0.42 | 0.465 | 0.158 |
| 12 | -0.436 | 0.328 | -0.322 | 0.215 |
| 13 | 0.472 | 0.374 | -0.547 | -1.01 |
| 14 | -0.436 | -0.219 | 0.018 | 0.427 |