Transcription factor | Nfia | ||||||||
Model | NFIA_MOUSE.H10MO.S | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 7 | ||||||||
Quality | S | ||||||||
Consensus | hYTGGCd | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 267 | ||||||||
TF family | Nuclear factor 1{7.1.2} | ||||||||
TF subfamily | NF-1A (NF-IA){7.1.2.0.1} | ||||||||
MGI | 108056 | ||||||||
EntrezGene | 18027 | ||||||||
UniProt ID | NFIA_MOUSE | ||||||||
UniProt AC | Q02780 | ||||||||
Comment | Model is applicable to several TFs or complex subunits: NFIA_MOUSE, NFIB_MOUSE, NFIC_MOUSE, NFIX_MOUSE. Secondary motif. | ||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 66.079 | 104.609 | 42.556 | 51.757 |
02 | 15.363 | 45.543 | 2.356 | 201.739 |
03 | 1.946 | 0.717 | 13.929 | 248.408 |
04 | 3.482 | 0.0 | 255.27 | 6.247 |
05 | 7.681 | 3.38 | 253.427 | 0.512 |
06 | 14.031 | 234.633 | 12.393 | 3.943 |
07 | 118.273 | 33.346 | 37.257 | 76.124 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.003 | 0.449 | -0.431 | -0.241 |
02 | -1.395 | -0.365 | -2.892 | 1.1 |
03 | -3.008 | -3.467 | -1.485 | 1.306 |
04 | -2.63 | -3.881 | 1.334 | -2.181 |
05 | -2.009 | -2.651 | 1.326 | -3.569 |
06 | -1.478 | 1.25 | -1.591 | -2.539 |
07 | 0.57 | -0.666 | -0.56 | 0.136 |