Model info
| Transcription factor | Nfat5 | ||||||||
| Model | NFAT5_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 15 | ||||||||
| Quality | D | ||||||||
| Consensus | STGGAAAAnYYCMKK | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 8 | ||||||||
| TF family | NFAT-related factors{6.1.3} | ||||||||
| TF subfamily | NFAT5 (TonEBP){6.1.3.0.5} | ||||||||
| MGI | 1859333 | ||||||||
| EntrezGene | 54446 | ||||||||
| UniProt ID | NFAT5_MOUSE | ||||||||
| UniProt AC | Q9WV30 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1.041 | 2.247 | 4.548 | 0.164 |
| 02 | 0.0 | 3.068 | 0.0 | 4.932 |
| 03 | 0.0 | 0.0 | 8.0 | 0.0 |
| 04 | 0.0 | 0.0 | 8.0 | 0.0 |
| 05 | 8.0 | 0.0 | 0.0 | 0.0 |
| 06 | 5.808 | 0.0 | 2.192 | 0.0 |
| 07 | 8.0 | 0.0 | 0.0 | 0.0 |
| 08 | 7.342 | 0.0 | 0.658 | 0.0 |
| 09 | 2.192 | 2.192 | 1.534 | 2.082 |
| 10 | 0.658 | 2.192 | 0.0 | 5.151 |
| 11 | 1.863 | 3.945 | 0.0 | 2.192 |
| 12 | 0.0 | 8.0 | 0.0 | 0.0 |
| 13 | 3.945 | 3.178 | 0.0 | 0.877 |
| 14 | 0.877 | 0.0 | 1.644 | 5.479 |
| 15 | 1.151 | 0.164 | 3.452 | 3.233 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.479 | 0.093 | 0.699 | -1.304 |
| 02 | -1.578 | 0.353 | -1.578 | 0.772 |
| 03 | -1.578 | -1.578 | 1.218 | -1.578 |
| 04 | -1.578 | -1.578 | 1.218 | -1.578 |
| 05 | 1.218 | -1.578 | -1.578 | -1.578 |
| 06 | 0.921 | -1.578 | 0.073 | -1.578 |
| 07 | 1.218 | -1.578 | -1.578 | -1.578 |
| 08 | 1.138 | -1.578 | -0.761 | -1.578 |
| 09 | 0.073 | 0.073 | -0.204 | 0.032 |
| 10 | -0.761 | 0.073 | -1.578 | 0.811 |
| 11 | -0.056 | 0.572 | -1.578 | 0.073 |
| 12 | -1.578 | 1.218 | -1.578 | -1.578 |
| 13 | 0.572 | 0.384 | -1.578 | -0.59 |
| 14 | -0.59 | -1.578 | -0.152 | 0.867 |
| 15 | -0.411 | -1.304 | 0.455 | 0.398 |