Model info
| Transcription factor | Nfatc4 | ||||||||
| Model | NFAC4_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 10 | ||||||||
| Quality | C | ||||||||
| Consensus | dGGAAARhdW | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 19 | ||||||||
| TF family | NFAT-related factors{6.1.3} | ||||||||
| TF subfamily | NFATc4 (NFAT3){6.1.3.0.4} | ||||||||
| MGI | 1920431 | ||||||||
| EntrezGene | 73181 | ||||||||
| UniProt ID | NFAC4_MOUSE | ||||||||
| UniProt AC | Q8K120 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 7.893 | 2.723 | 3.933 | 4.483 |
| 02 | 0.0 | 0.0 | 18.04 | 0.99 |
| 03 | 0.0 | 0.0 | 19.03 | 0.0 |
| 04 | 19.03 | 0.0 | 0.0 | 0.0 |
| 05 | 19.03 | 0.0 | 0.0 | 0.0 |
| 06 | 19.03 | 0.0 | 0.0 | 0.0 |
| 07 | 11.99 | 2.97 | 3.08 | 0.99 |
| 08 | 3.96 | 4.95 | 2.09 | 8.03 |
| 09 | 3.08 | 2.97 | 4.07 | 8.91 |
| 10 | 5.94 | 0.0 | 4.07 | 9.02 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.451 | -0.463 | -0.163 | -0.051 |
| 02 | -2.009 | -2.009 | 1.229 | -1.158 |
| 03 | -2.009 | -2.009 | 1.28 | -2.009 |
| 04 | 1.28 | -2.009 | -2.009 | -2.009 |
| 05 | 1.28 | -2.009 | -2.009 | -2.009 |
| 06 | 1.28 | -2.009 | -2.009 | -2.009 |
| 07 | 0.84 | -0.394 | -0.364 | -1.158 |
| 08 | -0.157 | 0.034 | -0.665 | 0.467 |
| 09 | -0.364 | -0.394 | -0.134 | 0.563 |
| 10 | 0.195 | -2.009 | -0.134 | 0.574 |