Model info
| Transcription factor | Nfatc1 | ||||||||
| Model | NFAC1_MOUSE.H10MO.S | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 13 | ||||||||
| Quality | S | ||||||||
| Consensus | hGGAAWdTTCMWW | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 558 | ||||||||
| TF family | NFAT-related factors{6.1.3} | ||||||||
| TF subfamily | NFATc1{6.1.3.0.1} | ||||||||
| MGI | 102469 | ||||||||
| EntrezGene | |||||||||
| UniProt ID | NFAC1_MOUSE | ||||||||
| UniProt AC | O88942 | ||||||||
| Comment | Secondary motif. | ||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 89.016 | 103.703 | 61.39 | 170.423 |
| 02 | 0.0 | 0.0 | 424.532 | 0.0 |
| 03 | 0.0 | 0.0 | 424.532 | 0.0 |
| 04 | 420.405 | 4.126 | 0.0 | 0.0 |
| 05 | 424.532 | 0.0 | 0.0 | 0.0 |
| 06 | 282.391 | 27.132 | 0.0 | 115.008 |
| 07 | 137.605 | 22.658 | 67.454 | 196.814 |
| 08 | 5.502 | 0.0 | 4.126 | 414.903 |
| 09 | 4.653 | 54.759 | 5.502 | 359.619 |
| 10 | 10.154 | 358.856 | 0.0 | 55.521 |
| 11 | 63.3 | 313.726 | 39.567 | 7.939 |
| 12 | 229.687 | 2.631 | 79.281 | 112.933 |
| 13 | 64.046 | 56.064 | 36.092 | 268.33 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.173 | -0.023 | -0.537 | 0.468 |
| 02 | -4.265 | -4.265 | 1.376 | -4.265 |
| 03 | -4.265 | -4.265 | 1.376 | -4.265 |
| 04 | 1.366 | -2.949 | -4.265 | -4.265 |
| 05 | 1.376 | -4.265 | -4.265 | -4.265 |
| 06 | 0.97 | -1.324 | -4.265 | 0.079 |
| 07 | 0.256 | -1.494 | -0.445 | 0.611 |
| 08 | -2.731 | -4.265 | -2.949 | 1.353 |
| 09 | -2.86 | -0.649 | -2.731 | 1.21 |
| 10 | -2.222 | 1.208 | -4.265 | -0.635 |
| 11 | -0.507 | 1.074 | -0.963 | -2.433 |
| 12 | 0.764 | -3.257 | -0.287 | 0.061 |
| 13 | -0.496 | -0.626 | -1.052 | 0.919 |