Model info
| Transcription factor | Nfatc1 | ||||||||
| Model | NFAC1_MOUSE.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 12 | ||||||||
| Quality | A | ||||||||
| Consensus | hhRYGGAAWdWY | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 756 | ||||||||
| TF family | NFAT-related factors{6.1.3} | ||||||||
| TF subfamily | NFATc1{6.1.3.0.1} | ||||||||
| MGI | 102469 | ||||||||
| EntrezGene | |||||||||
| UniProt ID | NFAC1_MOUSE | ||||||||
| UniProt AC | O88942 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 167.827 | 289.936 | 124.114 | 128.582 |
| 02 | 342.154 | 172.854 | 89.205 | 106.246 |
| 03 | 435.728 | 35.943 | 137.243 | 101.544 |
| 04 | 93.722 | 100.872 | 15.13 | 500.734 |
| 05 | 0.0 | 0.0 | 710.458 | 0.0 |
| 06 | 0.0 | 0.0 | 710.458 | 0.0 |
| 07 | 709.932 | 0.0 | 0.526 | 0.0 |
| 08 | 710.458 | 0.0 | 0.0 | 0.0 |
| 09 | 516.742 | 53.442 | 14.841 | 125.434 |
| 10 | 340.595 | 45.547 | 70.321 | 253.995 |
| 11 | 136.459 | 27.683 | 19.217 | 527.099 |
| 12 | 67.911 | 141.878 | 58.268 | 442.401 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.056 | 0.486 | -0.354 | -0.32 |
| 02 | 0.651 | -0.027 | -0.68 | -0.508 |
| 03 | 0.892 | -1.562 | -0.255 | -0.552 |
| 04 | -0.631 | -0.559 | -2.369 | 1.031 |
| 05 | -4.693 | -4.693 | 1.379 | -4.693 |
| 06 | -4.693 | -4.693 | 1.379 | -4.693 |
| 07 | 1.379 | -4.693 | -4.415 | -4.693 |
| 08 | 1.379 | -4.693 | -4.693 | -4.693 |
| 09 | 1.062 | -1.18 | -2.387 | -0.344 |
| 10 | 0.647 | -1.335 | -0.913 | 0.355 |
| 11 | -0.261 | -1.81 | -2.151 | 1.082 |
| 12 | -0.947 | -0.222 | -1.096 | 0.907 |