Transcription factor | Nfatc1 | ||||||||
Model | NFAC1_MOUSE.H10MO.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 12 | ||||||||
Quality | A | ||||||||
Consensus | hhRYGGAAWdWY | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 756 | ||||||||
TF family | NFAT-related factors{6.1.3} | ||||||||
TF subfamily | NFATc1{6.1.3.0.1} | ||||||||
MGI | 102469 | ||||||||
EntrezGene | |||||||||
UniProt ID | NFAC1_MOUSE | ||||||||
UniProt AC | O88942 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 167.827 | 289.936 | 124.114 | 128.582 |
02 | 342.154 | 172.854 | 89.205 | 106.246 |
03 | 435.728 | 35.943 | 137.243 | 101.544 |
04 | 93.722 | 100.872 | 15.13 | 500.734 |
05 | 0.0 | 0.0 | 710.458 | 0.0 |
06 | 0.0 | 0.0 | 710.458 | 0.0 |
07 | 709.932 | 0.0 | 0.526 | 0.0 |
08 | 710.458 | 0.0 | 0.0 | 0.0 |
09 | 516.742 | 53.442 | 14.841 | 125.434 |
10 | 340.595 | 45.547 | 70.321 | 253.995 |
11 | 136.459 | 27.683 | 19.217 | 527.099 |
12 | 67.911 | 141.878 | 58.268 | 442.401 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.056 | 0.486 | -0.354 | -0.32 |
02 | 0.651 | -0.027 | -0.68 | -0.508 |
03 | 0.892 | -1.562 | -0.255 | -0.552 |
04 | -0.631 | -0.559 | -2.369 | 1.031 |
05 | -4.693 | -4.693 | 1.379 | -4.693 |
06 | -4.693 | -4.693 | 1.379 | -4.693 |
07 | 1.379 | -4.693 | -4.415 | -4.693 |
08 | 1.379 | -4.693 | -4.693 | -4.693 |
09 | 1.062 | -1.18 | -2.387 | -0.344 |
10 | 0.647 | -1.335 | -0.913 | 0.355 |
11 | -0.261 | -1.81 | -2.151 | 1.082 |
12 | -0.947 | -0.222 | -1.096 | 0.907 |