Transcription factor | Myog | ||||||||
Model | MYOG_MOUSE.H10MO.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | ChIP-Seq | ||||||||
Model length | 11 | ||||||||
Quality | C | ||||||||
Consensus | vvvRRCAGCTG | ||||||||
wAUC | 0.936904934324688 | ||||||||
Best AUC | 0.936904934324688 | ||||||||
Benchmark datasets | 1 | ||||||||
Aligned words | 500 | ||||||||
TF family | MyoD / ASC-related factors{1.2.2} | ||||||||
TF subfamily | Myogenic transcription factors{1.2.2.1} | ||||||||
MGI | 97276 | ||||||||
EntrezGene | 17928 | ||||||||
UniProt ID | MYOG_MOUSE | ||||||||
UniProt AC | P12979 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 182.088 | 80.071 | 186.61 | 51.231 |
02 | 113.168 | 112.99 | 255.172 | 18.67 |
03 | 119.498 | 150.488 | 175.241 | 54.773 |
04 | 326.498 | 7.655 | 164.704 | 1.143 |
05 | 262.663 | 3.892 | 230.515 | 2.929 |
06 | 0.0 | 500.0 | 0.0 | 0.0 |
07 | 497.055 | 0.0 | 0.0 | 2.945 |
08 | 1.96 | 2.717 | 494.433 | 0.89 |
09 | 0.911 | 472.809 | 20.659 | 5.621 |
10 | 0.88 | 0.0 | 0.894 | 498.225 |
11 | 0.0 | 0.0 | 500.0 | 0.0 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.372 | -0.439 | 0.397 | -0.874 |
02 | -0.098 | -0.1 | 0.707 | -1.834 |
03 | -0.044 | 0.183 | 0.334 | -0.809 |
04 | 0.953 | -2.62 | 0.273 | -3.849 |
05 | 0.736 | -3.146 | 0.606 | -3.34 |
06 | -4.4 | 1.377 | -4.4 | -4.4 |
07 | 1.371 | -4.4 | -4.4 | -3.337 |
08 | -3.584 | -3.389 | 1.366 | -3.947 |
09 | -3.938 | 1.321 | -1.74 | -2.87 |
10 | -3.951 | -4.4 | -3.945 | 1.373 |
11 | -4.4 | -4.4 | 1.377 | -4.4 |