Model info
Transcription factorMYOG
ModelMYOG_HUMAN.H10MO.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length13
Quality
D
ConsensusbRdCAGCTGbWGn
wAUC
Best AUC
Benchmark datasets
Aligned words27
TF familyMyoD / ASC-related factors{1.2.2}
TF subfamilyMyogenic transcription factors{1.2.2.1}
HGNC7612
EntrezGene4656
UniProt IDMYOG_HUMAN
UniProt ACP15173
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.5651
0.0005 5.4201
0.0001 7.1721
PCM
ACGT
012.6496.8153.12514.077
028.2144.16713.5710.714
0315.1192.9765.2383.333
041.1925.4760.00.0
0526.6670.00.00.0
061.0713.09522.50.0
070.026.0710.5950.0
081.0710.00.025.595
090.00.026.6670.0
102.02414.6436.0713.929
118.9290.9522.02414.762
120.9523.92920.8330.952
133.33315.2384.7623.333
PWM
ACGT
01-0.7690.02-0.6410.688
020.188-0.4060.653-1.585
030.756-0.679-0.212-0.589
04-1.3141.256-2.211-2.211
051.3-2.211-2.211-2.211
06-1.375-0.6481.136-2.211
07-2.2111.279-1.665-2.211
08-1.375-2.211-2.2111.261
09-2.211-2.2111.3-2.211
10-0.9680.725-0.083-0.455
110.264-1.44-0.9680.733
12-1.44-0.4551.062-1.44
13-0.5890.763-0.294-0.589