Model info
| Transcription factor | MYOG | ||||||||
| Model | MYOG_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 13 | ||||||||
| Quality | D | ||||||||
| Consensus | bRdCAGCTGbWGn | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 27 | ||||||||
| TF family | MyoD / ASC-related factors{1.2.2} | ||||||||
| TF subfamily | Myogenic transcription factors{1.2.2.1} | ||||||||
| HGNC | 7612 | ||||||||
| EntrezGene | 4656 | ||||||||
| UniProt ID | MYOG_HUMAN | ||||||||
| UniProt AC | P15173 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.649 | 6.815 | 3.125 | 14.077 |
| 02 | 8.214 | 4.167 | 13.571 | 0.714 |
| 03 | 15.119 | 2.976 | 5.238 | 3.333 |
| 04 | 1.19 | 25.476 | 0.0 | 0.0 |
| 05 | 26.667 | 0.0 | 0.0 | 0.0 |
| 06 | 1.071 | 3.095 | 22.5 | 0.0 |
| 07 | 0.0 | 26.071 | 0.595 | 0.0 |
| 08 | 1.071 | 0.0 | 0.0 | 25.595 |
| 09 | 0.0 | 0.0 | 26.667 | 0.0 |
| 10 | 2.024 | 14.643 | 6.071 | 3.929 |
| 11 | 8.929 | 0.952 | 2.024 | 14.762 |
| 12 | 0.952 | 3.929 | 20.833 | 0.952 |
| 13 | 3.333 | 15.238 | 4.762 | 3.333 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.769 | 0.02 | -0.641 | 0.688 |
| 02 | 0.188 | -0.406 | 0.653 | -1.585 |
| 03 | 0.756 | -0.679 | -0.212 | -0.589 |
| 04 | -1.314 | 1.256 | -2.211 | -2.211 |
| 05 | 1.3 | -2.211 | -2.211 | -2.211 |
| 06 | -1.375 | -0.648 | 1.136 | -2.211 |
| 07 | -2.211 | 1.279 | -1.665 | -2.211 |
| 08 | -1.375 | -2.211 | -2.211 | 1.261 |
| 09 | -2.211 | -2.211 | 1.3 | -2.211 |
| 10 | -0.968 | 0.725 | -0.083 | -0.455 |
| 11 | 0.264 | -1.44 | -0.968 | 0.733 |
| 12 | -1.44 | -0.455 | 1.062 | -1.44 |
| 13 | -0.589 | 0.763 | -0.294 | -0.589 |