Model info
| Transcription factor | MYF6 | ||||||||
| Model | MYF6_HUMAN.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 7 | ||||||||
| Quality | C | ||||||||
| Consensus | GCAGCTG | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 9 | ||||||||
| TF family | MyoD / ASC-related factors{1.2.2} | ||||||||
| TF subfamily | Myogenic transcription factors{1.2.2.1} | ||||||||
| HGNC | 7566 | ||||||||
| EntrezGene | 4618 | ||||||||
| UniProt ID | MYF6_HUMAN | ||||||||
| UniProt AC | P23409 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1.242 | 0.226 | 5.306 | 0.226 |
| 02 | 0.0 | 7.0 | 0.0 | 0.0 |
| 03 | 7.0 | 0.0 | 0.0 | 0.0 |
| 04 | 0.0 | 0.0 | 7.0 | 0.0 |
| 05 | 0.0 | 3.952 | 3.048 | 0.0 |
| 06 | 0.0 | 0.0 | 0.0 | 7.0 |
| 07 | 0.0 | 0.0 | 7.0 | 0.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.258 | -1.144 | 0.952 | -1.144 |
| 02 | -1.525 | 1.208 | -1.525 | -1.525 |
| 03 | 1.208 | -1.525 | -1.525 | -1.525 |
| 04 | -1.525 | -1.525 | 1.208 | -1.525 |
| 05 | -1.525 | 0.685 | 0.458 | -1.525 |
| 06 | -1.525 | -1.525 | -1.525 | 1.208 |
| 07 | -1.525 | -1.525 | 1.208 | -1.525 |