Model info
| Transcription factor | MYC | ||||||||
| Model | MYC_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Consensus | dvvCACGTGKh | ||||||||
| wAUC | 0.7750361253679257 | ||||||||
| Best AUC | 0.8749887345708907 | ||||||||
| Benchmark datasets | 31 | ||||||||
| Aligned words | 360 | ||||||||
| TF family | bHLH-ZIP factors{1.2.6} | ||||||||
| TF subfamily | Myc / Max factors{1.2.6.5} | ||||||||
| HGNC | 7553 | ||||||||
| EntrezGene | 4609 | ||||||||
| UniProt ID | MYC_HUMAN | ||||||||
| UniProt AC | P01106 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 54.537 | 45.982 | 170.831 | 69.915 |
| 02 | 171.883 | 82.686 | 47.317 | 39.379 |
| 03 | 35.432 | 112.723 | 172.079 | 21.033 |
| 04 | 10.964 | 327.889 | 2.413 | 0.0 |
| 05 | 321.677 | 5.973 | 13.615 | 0.0 |
| 06 | 1.207 | 317.104 | 7.999 | 14.956 |
| 07 | 16.877 | 4.126 | 317.074 | 3.188 |
| 08 | 9.437 | 31.667 | 2.279 | 297.883 |
| 09 | 0.603 | 1.311 | 334.212 | 5.139 |
| 10 | 9.917 | 24.668 | 260.655 | 46.025 |
| 11 | 40.063 | 162.421 | 27.513 | 111.268 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.438 | -0.604 | 0.686 | -0.195 |
| 02 | 0.692 | -0.031 | -0.576 | -0.754 |
| 03 | -0.855 | 0.274 | 0.693 | -1.35 |
| 04 | -1.944 | 1.334 | -3.11 | -4.086 |
| 05 | 1.315 | -2.458 | -1.75 | -4.086 |
| 06 | -3.483 | 1.301 | -2.217 | -1.665 |
| 07 | -1.554 | -2.743 | 1.3 | -2.927 |
| 08 | -2.075 | -0.963 | -3.145 | 1.238 |
| 09 | -3.74 | -3.445 | 1.353 | -2.577 |
| 10 | -2.032 | -1.2 | 1.105 | -0.603 |
| 11 | -0.737 | 0.636 | -1.097 | 0.262 |