Model info
| Transcription factor | MYCN | ||||||||
| Model | MYCN_HUMAN.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 8 | ||||||||
| Quality | B | ||||||||
| Consensus | MCRCGTGv | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 553 | ||||||||
| TF family | bHLH-ZIP factors{1.2.6} | ||||||||
| TF subfamily | Myc / Max factors{1.2.6.5} | ||||||||
| HGNC | 7559 | ||||||||
| EntrezGene | 4613 | ||||||||
| UniProt ID | MYCN_HUMAN | ||||||||
| UniProt AC | P04198 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 106.939 | 264.271 | 86.85 | 10.399 |
| 02 | 21.706 | 446.752 | 0.0 | 0.0 |
| 03 | 326.85 | 1.357 | 104.142 | 36.11 |
| 04 | 0.0 | 468.459 | 0.0 | 0.0 |
| 05 | 32.38 | 5.427 | 429.974 | 0.678 |
| 06 | 0.0 | 1.357 | 0.0 | 467.102 |
| 07 | 0.0 | 0.678 | 466.424 | 1.357 |
| 08 | 78.894 | 181.041 | 190.02 | 18.504 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.09 | 0.807 | -0.294 | -2.297 |
| 02 | -1.63 | 1.329 | -4.346 | -4.346 |
| 03 | 1.018 | -3.714 | -0.116 | -1.148 |
| 04 | -4.346 | 1.377 | -4.346 | -4.346 |
| 05 | -1.252 | -2.835 | 1.291 | -3.981 |
| 06 | -4.346 | -3.714 | -4.346 | 1.374 |
| 07 | -4.346 | -3.981 | 1.372 | -3.714 |
| 08 | -0.389 | 0.431 | 0.479 | -1.778 |