Model info
| Transcription factor | MITF | ||||||||
| Model | MITF_HUMAN.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 10 | ||||||||
| Quality | C | ||||||||
| Consensus | vhCAYGTGvb | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 69 | ||||||||
| TF family | bHLH-ZIP factors{1.2.6} | ||||||||
| TF subfamily | TFE3-like factors{1.2.6.1} | ||||||||
| HGNC | 7105 | ||||||||
| EntrezGene | 4286 | ||||||||
| UniProt ID | MITF_HUMAN | ||||||||
| UniProt AC | O75030 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 20.7 | 10.552 | 27.504 | 9.399 |
| 02 | 15.222 | 13.031 | 10.61 | 29.292 |
| 03 | 0.0 | 68.155 | 0.0 | 0.0 |
| 04 | 67.117 | 0.0 | 1.038 | 0.0 |
| 05 | 4.382 | 8.995 | 8.418 | 46.359 |
| 06 | 0.923 | 4.152 | 63.081 | 0.0 |
| 07 | 0.0 | 0.0 | 1.038 | 67.117 |
| 08 | 0.0 | 0.0 | 68.155 | 0.0 |
| 09 | 31.021 | 22.372 | 8.534 | 6.227 |
| 10 | 1.211 | 20.815 | 20.7 | 25.428 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.184 | -0.444 | 0.456 | -0.549 |
| 02 | -0.106 | -0.25 | -0.439 | 0.517 |
| 03 | -2.842 | 1.342 | -2.842 | -2.842 |
| 04 | 1.326 | -2.842 | -2.157 | -2.842 |
| 05 | -1.202 | -0.588 | -0.647 | 0.963 |
| 06 | -2.213 | -1.246 | 1.265 | -2.842 |
| 07 | -2.842 | -2.842 | -2.157 | 1.326 |
| 08 | -2.842 | -2.842 | 1.342 | -2.842 |
| 09 | 0.573 | 0.258 | -0.635 | -0.91 |
| 10 | -2.077 | 0.19 | 0.184 | 0.381 |