Transcription factor | Meis1 | ||||||||
Model | MEIS1_MOUSE.H10MO.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 13 | ||||||||
Quality | C | ||||||||
Consensus | TGACAGbTKWMhd | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 40 | ||||||||
TF family | TALE-type homeo domain factors{3.1.4} | ||||||||
TF subfamily | MEIS{3.1.4.2} | ||||||||
MGI | 104717 | ||||||||
EntrezGene | 17268 | ||||||||
UniProt ID | MEIS1_MOUSE | ||||||||
UniProt AC | Q60954 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 0.0 | 0.0 | 0.0 | 39.347 |
02 | 0.968 | 0.0 | 38.379 | 0.0 |
03 | 36.444 | 0.0 | 0.968 | 1.935 |
04 | 0.968 | 36.659 | 0.0 | 1.72 |
05 | 36.552 | 0.968 | 0.968 | 0.86 |
06 | 0.0 | 5.805 | 31.606 | 1.935 |
07 | 2.795 | 10.643 | 9.568 | 16.341 |
08 | 0.0 | 0.968 | 0.0 | 38.379 |
09 | 0.0 | 2.903 | 8.6 | 27.844 |
10 | 12.363 | 2.903 | 0.968 | 23.114 |
11 | 24.941 | 7.74 | 3.763 | 2.903 |
12 | 10.535 | 12.471 | 3.763 | 12.578 |
13 | 9.326 | 3.628 | 20.937 | 5.456 |
A | C | G | T | |
---|---|---|---|---|
01 | -2.461 | -2.461 | -2.461 | 1.32 |
02 | -1.741 | -2.461 | 1.296 | -2.461 |
03 | 1.245 | -2.461 | -1.741 | -1.327 |
04 | -1.741 | 1.251 | -2.461 | -1.405 |
05 | 1.248 | -1.741 | -1.741 | -1.8 |
06 | -2.461 | -0.47 | 1.107 | -1.327 |
07 | -1.063 | 0.072 | -0.025 | 0.473 |
08 | -2.461 | -1.741 | -2.461 | 1.296 |
09 | -2.461 | -1.035 | -0.122 | 0.984 |
10 | 0.211 | -1.035 | -1.741 | 0.804 |
11 | 0.877 | -0.217 | -0.832 | -1.035 |
12 | 0.063 | 0.219 | -0.832 | 0.227 |
13 | -0.049 | -0.861 | 0.709 | -0.523 |