Transcription factor | Mef2d | ||||||||
Model | MEF2D_MOUSE.H10MO.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 12 | ||||||||
Quality | C | ||||||||
Consensus | KCTATTTTTAKv | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 11 | ||||||||
TF family | Regulators of differentiation{5.1.1} | ||||||||
TF subfamily | MEF-2{5.1.1.1} | ||||||||
MGI | 99533 | ||||||||
EntrezGene | 17261 | ||||||||
UniProt ID | MEF2D_MOUSE | ||||||||
UniProt AC | Q63943 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 1.505 | 0.579 | 6.484 | 2.432 |
02 | 0.0 | 9.147 | 1.042 | 0.811 |
03 | 0.0 | 0.0 | 0.0 | 11.0 |
04 | 9.958 | 0.0 | 1.042 | 0.0 |
05 | 0.0 | 1.042 | 0.0 | 9.958 |
06 | 2.084 | 0.0 | 0.0 | 8.916 |
07 | 1.042 | 0.0 | 0.0 | 9.958 |
08 | 4.168 | 0.0 | 0.0 | 6.832 |
09 | 1.042 | 0.0 | 0.0 | 9.958 |
10 | 9.958 | 0.0 | 1.042 | 0.0 |
11 | 0.926 | 0.0 | 7.063 | 3.011 |
12 | 3.474 | 4.284 | 2.663 | 0.579 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.465 | -1.045 | 0.749 | -0.1 |
02 | -1.721 | 1.068 | -0.713 | -0.865 |
03 | -1.721 | -1.721 | -1.721 | 1.242 |
04 | 1.148 | -1.721 | -0.713 | -1.721 |
05 | -1.721 | -0.713 | -1.721 | 1.148 |
06 | -0.222 | -1.721 | -1.721 | 1.044 |
07 | -0.713 | -1.721 | -1.721 | 1.148 |
08 | 0.353 | -1.721 | -1.721 | 0.797 |
09 | -0.713 | -1.721 | -1.721 | 1.148 |
10 | 1.148 | -1.721 | -0.713 | -1.721 |
11 | -0.786 | -1.721 | 0.828 | 0.075 |
12 | 0.196 | 0.377 | -0.026 | -1.045 |