Model info
| Transcription factor | MEF2D | ||||||||
| Model | MEF2D_HUMAN.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 12 | ||||||||
| Quality | C | ||||||||
| Consensus | KCTATTTTTAKv | ||||||||
| wAUC | 0.7605962202680538 | ||||||||
| Best AUC | 0.7605962202680538 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 11 | ||||||||
| TF family | Regulators of differentiation{5.1.1} | ||||||||
| TF subfamily | MEF-2{5.1.1.1} | ||||||||
| HGNC | 6997 | ||||||||
| EntrezGene | 4209 | ||||||||
| UniProt ID | MEF2D_HUMAN | ||||||||
| UniProt AC | Q14814 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1.505 | 0.579 | 6.484 | 2.432 |
| 02 | 0.0 | 9.147 | 1.042 | 0.811 |
| 03 | 0.0 | 0.0 | 0.0 | 11.0 |
| 04 | 9.958 | 0.0 | 1.042 | 0.0 |
| 05 | 0.0 | 1.042 | 0.0 | 9.958 |
| 06 | 2.084 | 0.0 | 0.0 | 8.916 |
| 07 | 1.042 | 0.0 | 0.0 | 9.958 |
| 08 | 4.168 | 0.0 | 0.0 | 6.832 |
| 09 | 1.042 | 0.0 | 0.0 | 9.958 |
| 10 | 9.958 | 0.0 | 1.042 | 0.0 |
| 11 | 0.926 | 0.0 | 7.063 | 3.011 |
| 12 | 3.474 | 4.284 | 2.663 | 0.579 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.465 | -1.045 | 0.749 | -0.1 |
| 02 | -1.721 | 1.068 | -0.713 | -0.865 |
| 03 | -1.721 | -1.721 | -1.721 | 1.242 |
| 04 | 1.148 | -1.721 | -0.713 | -1.721 |
| 05 | -1.721 | -0.713 | -1.721 | 1.148 |
| 06 | -0.222 | -1.721 | -1.721 | 1.044 |
| 07 | -0.713 | -1.721 | -1.721 | 1.148 |
| 08 | 0.353 | -1.721 | -1.721 | 0.797 |
| 09 | -0.713 | -1.721 | -1.721 | 1.148 |
| 10 | 1.148 | -1.721 | -0.713 | -1.721 |
| 11 | -0.786 | -1.721 | 0.828 | 0.075 |
| 12 | 0.196 | 0.377 | -0.026 | -1.045 |