Transcription factor | Mef2c | ||||||||
Model | MEF2C_MOUSE.H10MO.B | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | ![]() | ||||||||
LOGO (reverse complement) | ![]() | ||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 13 | ||||||||
Quality | B | ||||||||
Consensus | ddCTATAAATAGh | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 563 | ||||||||
TF family | Regulators of differentiation{5.1.1} | ||||||||
TF subfamily | MEF-2{5.1.1.1} | ||||||||
MGI | 99458 | ||||||||
EntrezGene | 17260 | ||||||||
UniProt ID | MEF2C_MOUSE | ||||||||
UniProt AC | Q8CFN5 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 172.839 | 38.421 | 94.932 | 265.113 |
02 | 103.028 | 17.992 | 199.414 | 250.872 |
03 | 20.471 | 548.895 | 0.0 | 1.939 |
04 | 0.0 | 0.0 | 0.0 | 571.305 |
05 | 571.305 | 0.0 | 0.0 | 0.0 |
06 | 259.416 | 0.0 | 0.0 | 311.889 |
07 | 503.519 | 0.0 | 0.0 | 67.786 |
08 | 510.878 | 0.0 | 0.0 | 60.427 |
09 | 570.045 | 0.0 | 0.0 | 1.26 |
10 | 0.0 | 0.0 | 0.0 | 571.305 |
11 | 571.305 | 0.0 | 0.0 | 0.0 |
12 | 2.648 | 1.272 | 567.385 | 0.0 |
13 | 216.164 | 176.659 | 66.96 | 111.522 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.189 | -1.284 | -0.403 | 0.613 |
02 | -0.322 | -1.998 | 0.331 | 0.559 |
03 | -1.879 | 1.338 | -4.511 | -3.713 |
04 | -4.511 | -4.511 | -4.511 | 1.378 |
05 | 1.378 | -4.511 | -4.511 | -4.511 |
06 | 0.592 | -4.511 | -4.511 | 0.775 |
07 | 1.252 | -4.511 | -4.511 | -0.733 |
08 | 1.267 | -4.511 | -4.511 | -0.845 |
09 | 1.376 | -4.511 | -4.511 | -3.926 |
10 | -4.511 | -4.511 | -4.511 | 1.378 |
11 | 1.378 | -4.511 | -4.511 | -4.511 |
12 | -3.529 | -3.922 | 1.371 | -4.511 |
13 | 0.411 | 0.21 | -0.745 | -0.244 |