Model info
| Transcription factor | Mef2c | ||||||||
| Model | MEF2C_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 13 | ||||||||
| Quality | B | ||||||||
| Consensus | ddCTATAAATAGh | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 563 | ||||||||
| TF family | Regulators of differentiation{5.1.1} | ||||||||
| TF subfamily | MEF-2{5.1.1.1} | ||||||||
| MGI | 99458 | ||||||||
| EntrezGene | 17260 | ||||||||
| UniProt ID | MEF2C_MOUSE | ||||||||
| UniProt AC | Q8CFN5 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 172.839 | 38.421 | 94.932 | 265.113 |
| 02 | 103.028 | 17.992 | 199.414 | 250.872 |
| 03 | 20.471 | 548.895 | 0.0 | 1.939 |
| 04 | 0.0 | 0.0 | 0.0 | 571.305 |
| 05 | 571.305 | 0.0 | 0.0 | 0.0 |
| 06 | 259.416 | 0.0 | 0.0 | 311.889 |
| 07 | 503.519 | 0.0 | 0.0 | 67.786 |
| 08 | 510.878 | 0.0 | 0.0 | 60.427 |
| 09 | 570.045 | 0.0 | 0.0 | 1.26 |
| 10 | 0.0 | 0.0 | 0.0 | 571.305 |
| 11 | 571.305 | 0.0 | 0.0 | 0.0 |
| 12 | 2.648 | 1.272 | 567.385 | 0.0 |
| 13 | 216.164 | 176.659 | 66.96 | 111.522 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.189 | -1.284 | -0.403 | 0.613 |
| 02 | -0.322 | -1.998 | 0.331 | 0.559 |
| 03 | -1.879 | 1.338 | -4.511 | -3.713 |
| 04 | -4.511 | -4.511 | -4.511 | 1.378 |
| 05 | 1.378 | -4.511 | -4.511 | -4.511 |
| 06 | 0.592 | -4.511 | -4.511 | 0.775 |
| 07 | 1.252 | -4.511 | -4.511 | -0.733 |
| 08 | 1.267 | -4.511 | -4.511 | -0.845 |
| 09 | 1.376 | -4.511 | -4.511 | -3.926 |
| 10 | -4.511 | -4.511 | -4.511 | 1.378 |
| 11 | 1.378 | -4.511 | -4.511 | -4.511 |
| 12 | -3.529 | -3.922 | 1.371 | -4.511 |
| 13 | 0.411 | 0.21 | -0.745 | -0.244 |